Gene : Glyma.11G047600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Genomic Order:  476
Name:  ? Glyma.11G047600 Secondary Identifier:  ? PAC:30530565
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G047600 0.5kb upstream 0.5kb upstream 5094 true Chr11: 3554755-3559848 Glycine max
Glyma.11G047600 0.5kb upstream 0.5kb upstream 500 false Chr11: 3554755-3555254 Glycine max
Glyma.11G047600 0.5kb downstream 0.5kb downstream 5094 true Chr11: 3555255-3560348 Glycine max
Glyma.11G047600 0.5kb downstream 0.5kb downstream 500 false Chr11: 3559849-3560348 Glycine max
Glyma.11G047600 1.0kb upstream 1.0kb upstream 5594 true Chr11: 3554255-3559848 Glycine max
Glyma.11G047600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3554255-3555254 Glycine max
Glyma.11G047600 1.0kb downstream 1.0kb downstream 5594 true Chr11: 3555255-3560848 Glycine max
Glyma.11G047600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3559849-3560848 Glycine max
Glyma.11G047600 2.0kb upstream 2.0kb upstream 6594 true Chr11: 3553255-3559848 Glycine max
Glyma.11G047600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3553255-3555254 Glycine max
Glyma.11G047600 2.0kb downstream 2.0kb downstream 6594 true Chr11: 3555255-3561848 Glycine max
Glyma.11G047600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3559849-3561848 Glycine max
Glyma.11G047600 5.0kb upstream 5.0kb upstream 9594 true Chr11: 3550255-3559848 Glycine max
Glyma.11G047600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3550255-3555254 Glycine max
Glyma.11G047600 5.0kb downstream 5.0kb downstream 9594 true Chr11: 3555255-3564848 Glycine max
Glyma.11G047600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3559849-3564848 Glycine max
Glyma.11G047600 10.0kb upstream 10.0kb upstream 14594 true Chr11: 3545255-3559848 Glycine max
Glyma.11G047600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3545255-3555254 Glycine max
Glyma.11G047600 10.0kb downstream 10.0kb downstream 14594 true Chr11: 3555255-3569848 Glycine max
Glyma.11G047600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3559849-3569848 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
122307807 5265 Fabidae View MSA
124066738 5270 Rosid View MSA
123739874 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.69058 0.0 8.29436    
cufflinks 3.19984 0.0 9.63453    
cufflinks 2.03533 0.0 6.49664   Low
cufflinks 5.3552 0.0 15.0829    
cufflinks 3.25082 0.0 9.75768    
cufflinks 5.26756 0.0 14.8707    
cufflinks 5.35224 0.0 15.1123    
cufflinks 5.11641 0.0 14.4958    
cufflinks 3.70925 0.0 10.9381    
cufflinks 2.923       High
cufflinks 0.731       Low
cufflinks 1.476        
cufflinks 1.883        
cufflinks 1.575        
cufflinks 0.862       Low
cufflinks 1.621        
cufflinks 1.152        
cufflinks 2.654       High
cufflinks 1.645        
cufflinks 1.492        
cufflinks 1.251        
cufflinks 1.547        
cufflinks 1.778        
cufflinks 0.872       Low
cufflinks 1.537        
cufflinks 1.001        

0 Strain