Gene : Glyma.11G048500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10177:SF255 - CYCLIN-D5-1 Genomic Order:  485
Name:  ? Glyma.11G048500 Secondary Identifier:  ? PAC:30528714
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G048500 0.5kb upstream 0.5kb upstream 3007 true Chr11: 3621762-3624768 Glycine max
Glyma.11G048500 0.5kb upstream 0.5kb upstream 500 false Chr11: 3624269-3624768 Glycine max
Glyma.11G048500 0.5kb downstream 0.5kb downstream 3007 true Chr11: 3621262-3624268 Glycine max
Glyma.11G048500 0.5kb downstream 0.5kb downstream 500 false Chr11: 3621262-3621761 Glycine max
Glyma.11G048500 1.0kb upstream 1.0kb upstream 3507 true Chr11: 3621762-3625268 Glycine max
Glyma.11G048500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3624269-3625268 Glycine max
Glyma.11G048500 1.0kb downstream 1.0kb downstream 3507 true Chr11: 3620762-3624268 Glycine max
Glyma.11G048500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3620762-3621761 Glycine max
Glyma.11G048500 2.0kb upstream 2.0kb upstream 4507 true Chr11: 3621762-3626268 Glycine max
Glyma.11G048500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3624269-3626268 Glycine max
Glyma.11G048500 2.0kb downstream 2.0kb downstream 4507 true Chr11: 3619762-3624268 Glycine max
Glyma.11G048500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3619762-3621761 Glycine max
Glyma.11G048500 5.0kb upstream 5.0kb upstream 7507 true Chr11: 3621762-3629268 Glycine max
Glyma.11G048500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3624269-3629268 Glycine max
Glyma.11G048500 5.0kb downstream 5.0kb downstream 7507 true Chr11: 3616762-3624268 Glycine max
Glyma.11G048500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3616762-3621761 Glycine max
Glyma.11G048500 10.0kb upstream 10.0kb upstream 12507 true Chr11: 3621762-3634268 Glycine max
Glyma.11G048500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3624269-3634268 Glycine max
Glyma.11G048500 10.0kb downstream 10.0kb downstream 12507 true Chr11: 3611762-3624268 Glycine max
Glyma.11G048500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3611762-3621761 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305750 5265 Fabidae View MSA
124070747 5270 Rosid View MSA
123751298 5271 Pentapetalae View MSA
122797790 5272 Eudicot View MSA
122049742 5273 Angiosperm View MSA
121311569 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.162001 0.0 0.628435 Low  
cufflinks 0.306758 0.0 1.15577    
cufflinks 0.0772476 0.0 0.30753 Low Low
cufflinks 0.488832 0.0 1.80009    
cufflinks 2.73613 0.0 8.5506   High
cufflinks 1.43796 0.0 4.87885   High
cufflinks 0.135986 0.0 0.531881 Low  
cufflinks 0.212585 0.0 0.813944 Low  
cufflinks 1.36093 0.0 4.64609    
cufflinks 0.497        
cufflinks 0.116       Low
cufflinks 0.437        
cufflinks 3.633       High
cufflinks 4.166       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.495        
cufflinks 0.292        
cufflinks 0.383        
cufflinks 0.185       Low
cufflinks 0.908        
cufflinks 0.282        
cufflinks 0.588        
cufflinks 1.262        
cufflinks 0.154       Low
cufflinks 0.6        
cufflinks 0.523        

0 Strain