Gene : Glyma.11G049800 G. max Wm82.a2.v1
Defline:  (1 of 77) PF03000 - NPH3 family (NPH3) Genomic Order:  498
Name:  ? Glyma.11G049800 Secondary Identifier:  ? PAC:30530703
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G049800 0.5kb upstream 0.5kb upstream 4593 true Chr11: 3736041-3740633 Glycine max
Glyma.11G049800 0.5kb upstream 0.5kb upstream 500 false Chr11: 3740134-3740633 Glycine max
Glyma.11G049800 0.5kb downstream 0.5kb downstream 4593 true Chr11: 3735541-3740133 Glycine max
Glyma.11G049800 0.5kb downstream 0.5kb downstream 500 false Chr11: 3735541-3736040 Glycine max
Glyma.11G049800 1.0kb upstream 1.0kb upstream 5093 true Chr11: 3736041-3741133 Glycine max
Glyma.11G049800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3740134-3741133 Glycine max
Glyma.11G049800 1.0kb downstream 1.0kb downstream 5093 true Chr11: 3735041-3740133 Glycine max
Glyma.11G049800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3735041-3736040 Glycine max
Glyma.11G049800 2.0kb upstream 2.0kb upstream 6093 true Chr11: 3736041-3742133 Glycine max
Glyma.11G049800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3740134-3742133 Glycine max
Glyma.11G049800 2.0kb downstream 2.0kb downstream 6093 true Chr11: 3734041-3740133 Glycine max
Glyma.11G049800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3734041-3736040 Glycine max
Glyma.11G049800 5.0kb upstream 5.0kb upstream 9093 true Chr11: 3736041-3745133 Glycine max
Glyma.11G049800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3740134-3745133 Glycine max
Glyma.11G049800 5.0kb downstream 5.0kb downstream 9093 true Chr11: 3731041-3740133 Glycine max
Glyma.11G049800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3731041-3736040 Glycine max
Glyma.11G049800 10.0kb upstream 10.0kb upstream 14093 true Chr11: 3736041-3750133 Glycine max
Glyma.11G049800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3740134-3750133 Glycine max
Glyma.11G049800 10.0kb downstream 10.0kb downstream 14093 true Chr11: 3726041-3740133 Glycine max
Glyma.11G049800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3726041-3736040 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302371 5265 Fabidae View MSA
124060971 5270 Rosid View MSA
123750839 5271 Pentapetalae View MSA
122787854 5272 Eudicot View MSA
122046367 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1497 0.0 38.1405   High
cufflinks 2.9289 0.0 12.8883    
cufflinks 6.05022 0.0 24.9409    
cufflinks 7.08043 0.0 27.5263   High
cufflinks 0.0530778 0.0 0.214765 Low  
cufflinks 0.0164895 0.0 0.0826453 Low Low
cufflinks 0.0877459 0.0 0.345876 Low  
cufflinks 1.14985 0.0 6.9227    
cufflinks 0.10268 0.0 0.401575 Low  
cufflinks 0.16        
cufflinks 0.001     Low Low
cufflinks 0.374        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.017     Low  
cufflinks 0.584        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.243        
cufflinks 0.393        
cufflinks 0.664        
cufflinks 0.001     Low Low
cufflinks 0.687        
cufflinks 0.324        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.813        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain