Gene : Glyma.11G051700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22846//PTHR22846:SF41 - WD40 REPEAT PROTEIN Genomic Order:  517
Name:  ? Glyma.11G051700 Secondary Identifier:  ? PAC:30529478
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G051700 0.5kb upstream 0.5kb upstream 11508 true Chr11: 3875359-3886866 Glycine max
Glyma.11G051700 0.5kb upstream 0.5kb upstream 500 false Chr11: 3886367-3886866 Glycine max
Glyma.11G051700 0.5kb downstream 0.5kb downstream 11508 true Chr11: 3874859-3886366 Glycine max
Glyma.11G051700 0.5kb downstream 0.5kb downstream 500 false Chr11: 3874859-3875358 Glycine max
Glyma.11G051700 1.0kb upstream 1.0kb upstream 12008 true Chr11: 3875359-3887366 Glycine max
Glyma.11G051700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3886367-3887366 Glycine max
Glyma.11G051700 1.0kb downstream 1.0kb downstream 12008 true Chr11: 3874359-3886366 Glycine max
Glyma.11G051700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3874359-3875358 Glycine max
Glyma.11G051700 2.0kb upstream 2.0kb upstream 13008 true Chr11: 3875359-3888366 Glycine max
Glyma.11G051700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3886367-3888366 Glycine max
Glyma.11G051700 2.0kb downstream 2.0kb downstream 13008 true Chr11: 3873359-3886366 Glycine max
Glyma.11G051700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3873359-3875358 Glycine max
Glyma.11G051700 5.0kb upstream 5.0kb upstream 16008 true Chr11: 3875359-3891366 Glycine max
Glyma.11G051700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3886367-3891366 Glycine max
Glyma.11G051700 5.0kb downstream 5.0kb downstream 16008 true Chr11: 3870359-3886366 Glycine max
Glyma.11G051700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3870359-3875358 Glycine max
Glyma.11G051700 10.0kb upstream 10.0kb upstream 21008 true Chr11: 3875359-3896366 Glycine max
Glyma.11G051700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3886367-3896366 Glycine max
Glyma.11G051700 10.0kb downstream 10.0kb downstream 21008 true Chr11: 3865359-3886366 Glycine max
Glyma.11G051700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3865359-3875358 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310546 5265 Fabidae View MSA
124060920 5270 Rosid View MSA
123745818 5271 Pentapetalae View MSA
122787360 5272 Eudicot View MSA
122041857 5273 Angiosperm View MSA
121347223 5274 Embryophyte View MSA
123428047 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.65052 0.0 20.7491    
cufflinks 8.9866 0.0 24.1849   High
cufflinks 6.9677 0.0 18.9455    
cufflinks 8.19451 0.0 22.1224    
cufflinks 7.06529 0.0 19.2787    
cufflinks 7.03859 0.0 19.1904    
cufflinks 9.43587 0.0 25.3539   High
cufflinks 5.74004 0.0 15.8763   Low
cufflinks 7.45039 0.0 20.2517    
cufflinks 1.423       Low
cufflinks 1.667        
cufflinks 2.237        
cufflinks 1.416       Low
cufflinks 1.788        
cufflinks 2.626        
cufflinks 2.872        
cufflinks 0.923       Low
cufflinks 2.393        
cufflinks 2.277        
cufflinks 3.68       High
cufflinks 1.946        
cufflinks 3.233       High
cufflinks 2.397        
cufflinks 2.229        
cufflinks 3.22       High
cufflinks 1.372       Low

0 Strain