Gene : Glyma.11G055700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13789:SF245 - ZEAXANTHIN EPOXIDASE, CHLOROPLASTIC Genomic Order:  557
Name:  ? Glyma.11G055700 Secondary Identifier:  ? PAC:30529538
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G055700 0.5kb upstream 0.5kb upstream 8941 true Chr11: 4207210-4216150 Glycine max
Glyma.11G055700 0.5kb upstream 0.5kb upstream 500 false Chr11: 4207210-4207709 Glycine max
Glyma.11G055700 0.5kb downstream 0.5kb downstream 8941 true Chr11: 4207710-4216650 Glycine max
Glyma.11G055700 0.5kb downstream 0.5kb downstream 500 false Chr11: 4216151-4216650 Glycine max
Glyma.11G055700 1.0kb upstream 1.0kb upstream 9441 true Chr11: 4206710-4216150 Glycine max
Glyma.11G055700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4206710-4207709 Glycine max
Glyma.11G055700 1.0kb downstream 1.0kb downstream 9441 true Chr11: 4207710-4217150 Glycine max
Glyma.11G055700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4216151-4217150 Glycine max
Glyma.11G055700 2.0kb upstream 2.0kb upstream 10441 true Chr11: 4205710-4216150 Glycine max
Glyma.11G055700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4205710-4207709 Glycine max
Glyma.11G055700 2.0kb downstream 2.0kb downstream 10441 true Chr11: 4207710-4218150 Glycine max
Glyma.11G055700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4216151-4218150 Glycine max
Glyma.11G055700 5.0kb upstream 5.0kb upstream 13441 true Chr11: 4202710-4216150 Glycine max
Glyma.11G055700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4202710-4207709 Glycine max
Glyma.11G055700 5.0kb downstream 5.0kb downstream 13441 true Chr11: 4207710-4221150 Glycine max
Glyma.11G055700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4216151-4221150 Glycine max
Glyma.11G055700 10.0kb upstream 10.0kb upstream 18441 true Chr11: 4197710-4216150 Glycine max
Glyma.11G055700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4197710-4207709 Glycine max
Glyma.11G055700 10.0kb downstream 10.0kb downstream 18441 true Chr11: 4207710-4226150 Glycine max
Glyma.11G055700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4216151-4226150 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311444 5265 Fabidae View MSA
124062370 5270 Rosid View MSA
123738980 5271 Pentapetalae View MSA
122793592 5272 Eudicot View MSA
122051676 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349162 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.02218 0.0 13.7799    
cufflinks 3.26366 0.0 9.3322    
cufflinks 7.22209 0.0 19.3806   High
cufflinks 3.60867 0.0 10.1877    
cufflinks 2.67258 0.0 7.85282    
cufflinks 2.45239 0.0 7.27444   Low
cufflinks 5.91021 0.0 16.0391    
cufflinks 5.29329 0.0 14.451    
cufflinks 1.99633 0.0 6.08809   Low
cufflinks 0.948        
cufflinks 1.121        
cufflinks 3.02       High
cufflinks 0.647        
cufflinks 0.484       Low
cufflinks 0.347       Low
cufflinks 1.279        
cufflinks 0.744        
cufflinks 0.704        
cufflinks 1.215        
cufflinks 0.548        
cufflinks 0.698        
cufflinks 0.886        
cufflinks 0.568        
cufflinks 0.575        
cufflinks 1.022        
cufflinks 1.288        

0 Strain