Gene : Glyma.11G042100 G. max Wm82.a2.v1
Genomic Order:  421 Name:  ? Glyma.11G042100
Secondary Identifier:  ? PAC:30530855
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G042100 0.5kb upstream 0.5kb upstream 3484 true Chr11: 3085381-3088864 Glycine max
Glyma.11G042100 0.5kb upstream 0.5kb upstream 500 false Chr11: 3085381-3085880 Glycine max
Glyma.11G042100 0.5kb downstream 0.5kb downstream 3484 true Chr11: 3085881-3089364 Glycine max
Glyma.11G042100 0.5kb downstream 0.5kb downstream 500 false Chr11: 3088865-3089364 Glycine max
Glyma.11G042100 1.0kb upstream 1.0kb upstream 3984 true Chr11: 3084881-3088864 Glycine max
Glyma.11G042100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3084881-3085880 Glycine max
Glyma.11G042100 1.0kb downstream 1.0kb downstream 3984 true Chr11: 3085881-3089864 Glycine max
Glyma.11G042100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3088865-3089864 Glycine max
Glyma.11G042100 2.0kb upstream 2.0kb upstream 4984 true Chr11: 3083881-3088864 Glycine max
Glyma.11G042100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3083881-3085880 Glycine max
Glyma.11G042100 2.0kb downstream 2.0kb downstream 4984 true Chr11: 3085881-3090864 Glycine max
Glyma.11G042100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3088865-3090864 Glycine max
Glyma.11G042100 5.0kb upstream 5.0kb upstream 7984 true Chr11: 3080881-3088864 Glycine max
Glyma.11G042100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3080881-3085880 Glycine max
Glyma.11G042100 5.0kb downstream 5.0kb downstream 7984 true Chr11: 3085881-3093864 Glycine max
Glyma.11G042100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3088865-3093864 Glycine max
Glyma.11G042100 10.0kb upstream 10.0kb upstream 12984 true Chr11: 3075881-3088864 Glycine max
Glyma.11G042100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3075881-3085880 Glycine max
Glyma.11G042100 10.0kb downstream 10.0kb downstream 12984 true Chr11: 3085881-3098864 Glycine max
Glyma.11G042100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3088865-3098864 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028162 5273 Angiosperm View MSA
122312154 5265 Fabidae View MSA
124070832 5270 Rosid View MSA
123743000 5271 Pentapetalae View MSA
122797525 5272 Eudicot View MSA
121297693 5274 Embryophyte View MSA
123335723 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8436 0.0 67.2854   High
cufflinks 6.95534 0.0 33.9184    
cufflinks 10.7539 0.0 44.8658    
cufflinks 5.95364 0.0 29.9184    
cufflinks 5.35301 0.0 27.999    
cufflinks 21.6403 0.0 74.3001   High
cufflinks 6.55913 0.0 32.7292    
cufflinks 11.1819 0.0 46.7932    
cufflinks 3.80808 0.0 21.2302   Low
cufflinks 0.941        
cufflinks 4.007       High
cufflinks 0.765        
cufflinks 0.795        
cufflinks 0.6       Low
cufflinks 1.03        
cufflinks 2.053        
cufflinks 2.16        
cufflinks 0.414       Low
cufflinks 1.065        
cufflinks 2.037        
cufflinks 2.124        
cufflinks 2.688        
cufflinks 1.335        
cufflinks 5.207       High
cufflinks 2.147        
cufflinks 2.158        

0 Strain