Gene : Glyma.11G043100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31100:SF14 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 21-RELATED Genomic Order:  431
Name:  ? Glyma.11G043100 Secondary Identifier:  ? PAC:30528809
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G043100 0.5kb upstream 0.5kb upstream 1253 true Chr11: 3156212-3157464 Glycine max
Glyma.11G043100 0.5kb upstream 0.5kb upstream 500 false Chr11: 3156965-3157464 Glycine max
Glyma.11G043100 0.5kb downstream 0.5kb downstream 1253 true Chr11: 3155712-3156964 Glycine max
Glyma.11G043100 0.5kb downstream 0.5kb downstream 500 false Chr11: 3155712-3156211 Glycine max
Glyma.11G043100 1.0kb upstream 1.0kb upstream 1753 true Chr11: 3156212-3157964 Glycine max
Glyma.11G043100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3156965-3157964 Glycine max
Glyma.11G043100 1.0kb downstream 1.0kb downstream 1753 true Chr11: 3155212-3156964 Glycine max
Glyma.11G043100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3155212-3156211 Glycine max
Glyma.11G043100 2.0kb upstream 2.0kb upstream 2753 true Chr11: 3156212-3158964 Glycine max
Glyma.11G043100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3156965-3158964 Glycine max
Glyma.11G043100 2.0kb downstream 2.0kb downstream 2753 true Chr11: 3154212-3156964 Glycine max
Glyma.11G043100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3154212-3156211 Glycine max
Glyma.11G043100 5.0kb upstream 5.0kb upstream 5753 true Chr11: 3156212-3161964 Glycine max
Glyma.11G043100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3156965-3161964 Glycine max
Glyma.11G043100 5.0kb downstream 5.0kb downstream 5753 true Chr11: 3151212-3156964 Glycine max
Glyma.11G043100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3151212-3156211 Glycine max
Glyma.11G043100 10.0kb upstream 10.0kb upstream 10753 true Chr11: 3156212-3166964 Glycine max
Glyma.11G043100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3156965-3166964 Glycine max
Glyma.11G043100 10.0kb downstream 10.0kb downstream 10753 true Chr11: 3146212-3156964 Glycine max
Glyma.11G043100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3146212-3156211 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255174 5265 Fabidae View MSA
123997006 5270 Rosid View MSA
123571372 5271 Pentapetalae View MSA
122606098 5272 Eudicot View MSA
122049731 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11068 0.0 4.11902    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0340144 0.0 0.152631 Low Low
cufflinks 3.49178 0.0 11.8047    
cufflinks 8.33048 0.0 25.266   High
cufflinks 0.0480795 0.0 0.207074 Low Low
cufflinks 1.03392 0.0 3.86235    
cufflinks 6.44592 0.0 20.3673    
cufflinks 0.332        
cufflinks 30.577     High High
cufflinks 0.021     Low Low
cufflinks 11.668     High  
cufflinks 7.942     High  
cufflinks 13.419     High  
cufflinks 0.267        
cufflinks 20.399     High  
cufflinks 0.093     Low Low
cufflinks 0.085     Low Low
cufflinks 0.26        
cufflinks 25.768     High High
cufflinks 0.481        
cufflinks 0.178        
cufflinks 39.001     High High
cufflinks 0.193        
cufflinks 28.801     High High

0 Strain