Gene : Glyma.11G043300 G. max Wm82.a2.v1
Defline:  (1 of 2) 3.5.1.16 - Acetylornithine deacetylase / N-acetylornithinase Genomic Order:  433
Name:  ? Glyma.11G043300 Secondary Identifier:  ? PAC:30529940
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARGSYN-PWY Glycine max pathologic  
Gmax GLUTORN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G043300 0.5kb upstream 0.5kb upstream 3977 true Chr11: 3189832-3193808 Glycine max
Glyma.11G043300 0.5kb upstream 0.5kb upstream 500 false Chr11: 3189832-3190331 Glycine max
Glyma.11G043300 0.5kb downstream 0.5kb downstream 3977 true Chr11: 3190332-3194308 Glycine max
Glyma.11G043300 0.5kb downstream 0.5kb downstream 500 false Chr11: 3193809-3194308 Glycine max
Glyma.11G043300 1.0kb upstream 1.0kb upstream 4477 true Chr11: 3189332-3193808 Glycine max
Glyma.11G043300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3189332-3190331 Glycine max
Glyma.11G043300 1.0kb downstream 1.0kb downstream 4477 true Chr11: 3190332-3194808 Glycine max
Glyma.11G043300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3193809-3194808 Glycine max
Glyma.11G043300 2.0kb upstream 2.0kb upstream 5477 true Chr11: 3188332-3193808 Glycine max
Glyma.11G043300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3188332-3190331 Glycine max
Glyma.11G043300 2.0kb downstream 2.0kb downstream 5477 true Chr11: 3190332-3195808 Glycine max
Glyma.11G043300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3193809-3195808 Glycine max
Glyma.11G043300 5.0kb upstream 5.0kb upstream 8477 true Chr11: 3185332-3193808 Glycine max
Glyma.11G043300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3185332-3190331 Glycine max
Glyma.11G043300 5.0kb downstream 5.0kb downstream 8477 true Chr11: 3190332-3198808 Glycine max
Glyma.11G043300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3193809-3198808 Glycine max
Glyma.11G043300 10.0kb upstream 10.0kb upstream 13477 true Chr11: 3180332-3193808 Glycine max
Glyma.11G043300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3180332-3190331 Glycine max
Glyma.11G043300 10.0kb downstream 10.0kb downstream 13477 true Chr11: 3190332-3203808 Glycine max
Glyma.11G043300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3193809-3203808 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308500 5265 Fabidae View MSA
124065214 5270 Rosid View MSA
123738237 5271 Pentapetalae View MSA
122790334 5272 Eudicot View MSA
122044666 5273 Angiosperm View MSA
121348165 5274 Embryophyte View MSA
123425283 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.7959 0.0 91.2371 High  
cufflinks 22.3369 0.0 59.5989 High  
cufflinks 16.776 0.0 44.8695   Low
cufflinks 17.132 0.0 45.8076   Low
cufflinks 33.201 0.0 89.6388 High  
cufflinks 27.3013 0.0 73.1241 High  
cufflinks 42.4138 0.0 116.2 High High
cufflinks 15.0435 0.0 40.3688   Low
cufflinks 27.1104 0.0 72.5732 High  
cufflinks 8.612     High  
cufflinks 5.696     High Low
cufflinks 8.975     High  
cufflinks 14.245     High High
cufflinks 19.694     High High
cufflinks 6.479     High  
cufflinks 9.851     High  
cufflinks 6.135     High Low
cufflinks 8.192     High  
cufflinks 10.502     High  
cufflinks 11.167     High  
cufflinks 6.687     High  
cufflinks 9.92     High  
cufflinks 7.856     High  
cufflinks 6.645     High  
cufflinks 8.571     High  
cufflinks 7.426     High  

0 Strain