Gene : Glyma.11G044800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31062:SF48 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 6-RELATED Genomic Order:  448
Name:  ? Glyma.11G044800 Secondary Identifier:  ? PAC:30528736
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G044800 0.5kb upstream 0.5kb upstream 2654 true Chr11: 3310585-3313238 Glycine max
Glyma.11G044800 0.5kb upstream 0.5kb upstream 500 false Chr11: 3310585-3311084 Glycine max
Glyma.11G044800 0.5kb downstream 0.5kb downstream 2654 true Chr11: 3311085-3313738 Glycine max
Glyma.11G044800 0.5kb downstream 0.5kb downstream 500 false Chr11: 3313239-3313738 Glycine max
Glyma.11G044800 1.0kb upstream 1.0kb upstream 3154 true Chr11: 3310085-3313238 Glycine max
Glyma.11G044800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3310085-3311084 Glycine max
Glyma.11G044800 1.0kb downstream 1.0kb downstream 3154 true Chr11: 3311085-3314238 Glycine max
Glyma.11G044800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3313239-3314238 Glycine max
Glyma.11G044800 2.0kb upstream 2.0kb upstream 4154 true Chr11: 3309085-3313238 Glycine max
Glyma.11G044800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3309085-3311084 Glycine max
Glyma.11G044800 2.0kb downstream 2.0kb downstream 4154 true Chr11: 3311085-3315238 Glycine max
Glyma.11G044800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3313239-3315238 Glycine max
Glyma.11G044800 5.0kb upstream 5.0kb upstream 7154 true Chr11: 3306085-3313238 Glycine max
Glyma.11G044800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3306085-3311084 Glycine max
Glyma.11G044800 5.0kb downstream 5.0kb downstream 7154 true Chr11: 3311085-3318238 Glycine max
Glyma.11G044800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3313239-3318238 Glycine max
Glyma.11G044800 10.0kb upstream 10.0kb upstream 12154 true Chr11: 3301085-3313238 Glycine max
Glyma.11G044800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3301085-3311084 Glycine max
Glyma.11G044800 10.0kb downstream 10.0kb downstream 12154 true Chr11: 3311085-3323238 Glycine max
Glyma.11G044800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3313239-3323238 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309774 5265 Fabidae View MSA
124050307 5270 Rosid View MSA
123753126 5271 Pentapetalae View MSA
122793763 5272 Eudicot View MSA
122045227 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.26786 0.0 7.45825    
cufflinks 5.44056 0.0 15.8479    
cufflinks 13.3155 0.0 35.8058    
cufflinks 28.7881 0.0 77.2849 High High
cufflinks 0.118888 0.0 0.46999 Low  
cufflinks 0.84713 0.0 3.05641    
cufflinks 0.0121854 0.0 0.0558117 Low Low
cufflinks 6.18397 0.0 17.7129    
cufflinks 0.071727 0.0 0.2888 Low Low
cufflinks 7.401        
cufflinks 0.008     Low Low
cufflinks 12.429     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.267        
cufflinks 0.148        
cufflinks 10.094     High  
cufflinks 6.358        
cufflinks 3.002        
cufflinks 0.057     Low  
cufflinks 4.026        
cufflinks 8.923     High  
cufflinks 0.009     Low Low
cufflinks 2.773        
cufflinks 0.039     Low Low

0 Strain