Gene : Glyma.11G045100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24326:SF252 - HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 Genomic Order:  451
Name:  ? Glyma.11G045100 Secondary Identifier:  ? PAC:30529240
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G045100 0.5kb upstream 0.5kb upstream 2361 true Chr11: 3326055-3328415 Glycine max
Glyma.11G045100 0.5kb upstream 0.5kb upstream 500 false Chr11: 3327916-3328415 Glycine max
Glyma.11G045100 0.5kb downstream 0.5kb downstream 2361 true Chr11: 3325555-3327915 Glycine max
Glyma.11G045100 0.5kb downstream 0.5kb downstream 500 false Chr11: 3325555-3326054 Glycine max
Glyma.11G045100 1.0kb upstream 1.0kb upstream 2861 true Chr11: 3326055-3328915 Glycine max
Glyma.11G045100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3327916-3328915 Glycine max
Glyma.11G045100 1.0kb downstream 1.0kb downstream 2861 true Chr11: 3325055-3327915 Glycine max
Glyma.11G045100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3325055-3326054 Glycine max
Glyma.11G045100 2.0kb upstream 2.0kb upstream 3861 true Chr11: 3326055-3329915 Glycine max
Glyma.11G045100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3327916-3329915 Glycine max
Glyma.11G045100 2.0kb downstream 2.0kb downstream 3861 true Chr11: 3324055-3327915 Glycine max
Glyma.11G045100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3324055-3326054 Glycine max
Glyma.11G045100 5.0kb upstream 5.0kb upstream 6861 true Chr11: 3326055-3332915 Glycine max
Glyma.11G045100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3327916-3332915 Glycine max
Glyma.11G045100 5.0kb downstream 5.0kb downstream 6861 true Chr11: 3321055-3327915 Glycine max
Glyma.11G045100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3321055-3326054 Glycine max
Glyma.11G045100 10.0kb upstream 10.0kb upstream 11861 true Chr11: 3326055-3337915 Glycine max
Glyma.11G045100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3327916-3337915 Glycine max
Glyma.11G045100 10.0kb downstream 10.0kb downstream 11861 true Chr11: 3316055-3327915 Glycine max
Glyma.11G045100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3316055-3326054 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300653 5265 Fabidae View MSA
124064901 5270 Rosid View MSA
123747506 5271 Pentapetalae View MSA
122796686 5272 Eudicot View MSA
122050134 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4971 0.0 38.9599    
cufflinks 2.08249 0.0 6.94821   Low
cufflinks 2.83383 0.0 9.06599    
cufflinks 16.0233 0.0 42.8907   High
cufflinks 7.31703 0.0 20.6311    
cufflinks 2.21353 0.0 7.32824   Low
cufflinks 5.11166 0.0 15.0717    
cufflinks 20.9556 0.0 55.9099   High
cufflinks 6.61875 0.0 18.8522    
cufflinks 8.518     High High
cufflinks 3.803        
cufflinks 2.964        
cufflinks 2.662        
cufflinks 0.228       Low
cufflinks 1.649        
cufflinks 4.787        
cufflinks 3.843        
cufflinks 3.419        
cufflinks 2.576        
cufflinks 6.42        
cufflinks 4.785        
cufflinks 5.999        
cufflinks 4.654        
cufflinks 4.118        
cufflinks 7.22     High  
cufflinks 7.075     High  

0 Strain