Gene : Glyma.11G045600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11751:SF431 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 4-RELATED Genomic Order:  456
Name:  ? Glyma.11G045600 Secondary Identifier:  ? PAC:30530066
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G045600 0.5kb upstream 0.5kb upstream 2733 true Chr11: 3379030-3381762 Glycine max
Glyma.11G045600 0.5kb upstream 0.5kb upstream 500 false Chr11: 3381263-3381762 Glycine max
Glyma.11G045600 0.5kb downstream 0.5kb downstream 2733 true Chr11: 3378530-3381262 Glycine max
Glyma.11G045600 0.5kb downstream 0.5kb downstream 500 false Chr11: 3378530-3379029 Glycine max
Glyma.11G045600 1.0kb upstream 1.0kb upstream 3233 true Chr11: 3379030-3382262 Glycine max
Glyma.11G045600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3381263-3382262 Glycine max
Glyma.11G045600 1.0kb downstream 1.0kb downstream 3233 true Chr11: 3378030-3381262 Glycine max
Glyma.11G045600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3378030-3379029 Glycine max
Glyma.11G045600 2.0kb upstream 2.0kb upstream 4233 true Chr11: 3379030-3383262 Glycine max
Glyma.11G045600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3381263-3383262 Glycine max
Glyma.11G045600 2.0kb downstream 2.0kb downstream 4233 true Chr11: 3377030-3381262 Glycine max
Glyma.11G045600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3377030-3379029 Glycine max
Glyma.11G045600 5.0kb upstream 5.0kb upstream 7233 true Chr11: 3379030-3386262 Glycine max
Glyma.11G045600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3381263-3386262 Glycine max
Glyma.11G045600 5.0kb downstream 5.0kb downstream 7233 true Chr11: 3374030-3381262 Glycine max
Glyma.11G045600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3374030-3379029 Glycine max
Glyma.11G045600 10.0kb upstream 10.0kb upstream 12233 true Chr11: 3379030-3391262 Glycine max
Glyma.11G045600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3381263-3391262 Glycine max
Glyma.11G045600 10.0kb downstream 10.0kb downstream 12233 true Chr11: 3369030-3381262 Glycine max
Glyma.11G045600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3369030-3379029 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313200 5265 Fabidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0268987 0.0 0.114628 Low  
cufflinks 0.013196 0.0 0.0598443 Low Low
cufflinks 0.0612612 0.0 0.248351 Low  
cufflinks 0.167468 0.0 0.652611 Low High
cufflinks 0.0555198 0.0 0.225541 Low  
cufflinks 0.0249142 0.0 0.106771 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0391148 0.0 0.161984 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.594        
cufflinks 0.504        
cufflinks 0.121        
cufflinks 0.216        
cufflinks 0.079        
cufflinks 0.423        
cufflinks 0.057     Low  
cufflinks 7.703     High High
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.431        
cufflinks 0.02     Low Low
cufflinks 0.022     Low Low
cufflinks 0.165        
cufflinks 0.015     Low Low
cufflinks 1.088       High

0 Strain