Gene : Glyma.11G036400 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  364
Name:  ? Glyma.11G036400 Secondary Identifier:  ? PAC:30528883
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G036400 0.5kb upstream 0.5kb upstream 1495 true Chr11: 2620193-2621687 Glycine max
Glyma.11G036400 0.5kb upstream 0.5kb upstream 500 false Chr11: 2621188-2621687 Glycine max
Glyma.11G036400 0.5kb downstream 0.5kb downstream 1495 true Chr11: 2619693-2621187 Glycine max
Glyma.11G036400 0.5kb downstream 0.5kb downstream 500 false Chr11: 2619693-2620192 Glycine max
Glyma.11G036400 1.0kb upstream 1.0kb upstream 1995 true Chr11: 2620193-2622187 Glycine max
Glyma.11G036400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2621188-2622187 Glycine max
Glyma.11G036400 1.0kb downstream 1.0kb downstream 1995 true Chr11: 2619193-2621187 Glycine max
Glyma.11G036400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2619193-2620192 Glycine max
Glyma.11G036400 2.0kb upstream 2.0kb upstream 2995 true Chr11: 2620193-2623187 Glycine max
Glyma.11G036400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2621188-2623187 Glycine max
Glyma.11G036400 2.0kb downstream 2.0kb downstream 2995 true Chr11: 2618193-2621187 Glycine max
Glyma.11G036400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2618193-2620192 Glycine max
Glyma.11G036400 5.0kb upstream 5.0kb upstream 5995 true Chr11: 2620193-2626187 Glycine max
Glyma.11G036400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2621188-2626187 Glycine max
Glyma.11G036400 5.0kb downstream 5.0kb downstream 5995 true Chr11: 2615193-2621187 Glycine max
Glyma.11G036400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2615193-2620192 Glycine max
Glyma.11G036400 10.0kb upstream 10.0kb upstream 10995 true Chr11: 2620193-2631187 Glycine max
Glyma.11G036400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2621188-2631187 Glycine max
Glyma.11G036400 10.0kb downstream 10.0kb downstream 10995 true Chr11: 2610193-2621187 Glycine max
Glyma.11G036400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2610193-2620192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311424 5265 Fabidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.5872 0.0 111.615 High High
cufflinks 2.32701 0.0 8.004    
cufflinks 4.37426 0.0 13.9788    
cufflinks 2.43444 0.0 8.32043    
cufflinks 12.3267 0.0 34.0102    
cufflinks 39.4529 0.0 105.716 High High
cufflinks 0.502498 0.0 1.89907   Low
cufflinks 3.95083 0.0 12.6507    
cufflinks 9.49346 0.0 26.9601    
cufflinks 17.817     High  
cufflinks 8.283     High  
cufflinks 23.17     High  
cufflinks 17.957     High  
cufflinks 7.527     High  
cufflinks 4.09       Low
cufflinks 44.707     High High
cufflinks 5.373       Low
cufflinks 38.4     High High
cufflinks 7.222        
cufflinks 25.073     High  
cufflinks 7.169     High  
cufflinks 25.932     High  
cufflinks 13.283     High  
cufflinks 11.197     High  
cufflinks 8.762     High  
cufflinks 12.752     High  

0 Strain