Gene : Glyma.11G039000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12395 - DOM-3 RELATED Genomic Order:  390
Name:  ? Glyma.11G039000 Secondary Identifier:  ? PAC:30528820
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G039000 0.5kb upstream 0.5kb upstream 5391 true Chr11: 2778583-2783973 Glycine max
Glyma.11G039000 0.5kb upstream 0.5kb upstream 500 false Chr11: 2778583-2779082 Glycine max
Glyma.11G039000 0.5kb downstream 0.5kb downstream 5391 true Chr11: 2779083-2784473 Glycine max
Glyma.11G039000 0.5kb downstream 0.5kb downstream 500 false Chr11: 2783974-2784473 Glycine max
Glyma.11G039000 1.0kb upstream 1.0kb upstream 5891 true Chr11: 2778083-2783973 Glycine max
Glyma.11G039000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2778083-2779082 Glycine max
Glyma.11G039000 1.0kb downstream 1.0kb downstream 5891 true Chr11: 2779083-2784973 Glycine max
Glyma.11G039000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2783974-2784973 Glycine max
Glyma.11G039000 2.0kb upstream 2.0kb upstream 6891 true Chr11: 2777083-2783973 Glycine max
Glyma.11G039000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2777083-2779082 Glycine max
Glyma.11G039000 2.0kb downstream 2.0kb downstream 6891 true Chr11: 2779083-2785973 Glycine max
Glyma.11G039000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2783974-2785973 Glycine max
Glyma.11G039000 5.0kb upstream 5.0kb upstream 9891 true Chr11: 2774083-2783973 Glycine max
Glyma.11G039000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2774083-2779082 Glycine max
Glyma.11G039000 5.0kb downstream 5.0kb downstream 9891 true Chr11: 2779083-2788973 Glycine max
Glyma.11G039000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2783974-2788973 Glycine max
Glyma.11G039000 10.0kb upstream 10.0kb upstream 14891 true Chr11: 2769083-2783973 Glycine max
Glyma.11G039000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2769083-2779082 Glycine max
Glyma.11G039000 10.0kb downstream 10.0kb downstream 14891 true Chr11: 2779083-2793973 Glycine max
Glyma.11G039000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2783974-2793973 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306267 5265 Fabidae View MSA
124073071 5270 Rosid View MSA
123741994 5271 Pentapetalae View MSA
122794748 5272 Eudicot View MSA
122048232 5273 Angiosperm View MSA
121348274 5274 Embryophyte View MSA
123425887 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.04437 0.0 25.9014    
cufflinks 7.62178 0.0 27.9454    
cufflinks 7.76719 0.0 27.9642   High
cufflinks 7.99623 0.0 28.8351   High
cufflinks 5.98341 0.0 22.7635    
cufflinks 5.45676 0.0 21.2498   Low
cufflinks 7.13691 0.0 26.4574    
cufflinks 6.60157 0.0 24.6139    
cufflinks 5.826 0.0 22.2956   Low
cufflinks 1.665        
cufflinks 2.53       High
cufflinks 1.452        
cufflinks 1.403        
cufflinks 1.394        
cufflinks 2.463       High
cufflinks 1.343       Low
cufflinks 2.546       High
cufflinks 1.642        
cufflinks 2.166        
cufflinks 1.42        
cufflinks 1.874        
cufflinks 1.365       Low
cufflinks 2.017        
cufflinks 2.154        
cufflinks 1.321       Low
cufflinks 2.076        

0 Strain