Gene : Glyma.11G039900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16166:SF105 - PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN Genomic Order:  399
Name:  ? Glyma.11G039900 Secondary Identifier:  ? PAC:30531420
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G039900 0.5kb upstream 0.5kb upstream 55857 true Chr11: 2862378-2918234 Glycine max
Glyma.11G039900 0.5kb upstream 0.5kb upstream 500 false Chr11: 2862378-2862877 Glycine max
Glyma.11G039900 0.5kb downstream 0.5kb downstream 55857 true Chr11: 2862878-2918734 Glycine max
Glyma.11G039900 0.5kb downstream 0.5kb downstream 500 false Chr11: 2918235-2918734 Glycine max
Glyma.11G039900 1.0kb upstream 1.0kb upstream 56357 true Chr11: 2861878-2918234 Glycine max
Glyma.11G039900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2861878-2862877 Glycine max
Glyma.11G039900 1.0kb downstream 1.0kb downstream 56357 true Chr11: 2862878-2919234 Glycine max
Glyma.11G039900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2918235-2919234 Glycine max
Glyma.11G039900 2.0kb upstream 2.0kb upstream 57357 true Chr11: 2860878-2918234 Glycine max
Glyma.11G039900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2860878-2862877 Glycine max
Glyma.11G039900 2.0kb downstream 2.0kb downstream 57357 true Chr11: 2862878-2920234 Glycine max
Glyma.11G039900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2918235-2920234 Glycine max
Glyma.11G039900 5.0kb upstream 5.0kb upstream 60357 true Chr11: 2857878-2918234 Glycine max
Glyma.11G039900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2857878-2862877 Glycine max
Glyma.11G039900 5.0kb downstream 5.0kb downstream 60357 true Chr11: 2862878-2923234 Glycine max
Glyma.11G039900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2918235-2923234 Glycine max
Glyma.11G039900 10.0kb upstream 10.0kb upstream 65357 true Chr11: 2852878-2918234 Glycine max
Glyma.11G039900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2852878-2862877 Glycine max
Glyma.11G039900 10.0kb downstream 10.0kb downstream 65357 true Chr11: 2862878-2928234 Glycine max
Glyma.11G039900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2918235-2928234 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300896 5265 Fabidae View MSA
124051045 5270 Rosid View MSA
123737452 5271 Pentapetalae View MSA
122785660 5272 Eudicot View MSA
122048720 5273 Angiosperm View MSA
121349358 5274 Embryophyte View MSA
123424206 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.0923 0.0 27.1035    
cufflinks 7.13285 0.0 20.5746    
cufflinks 9.05922 0.0 27.189    
cufflinks 9.52991 0.0 28.6814    
cufflinks 6.36388 0.0 18.0423    
cufflinks 4.06349 0.0 11.0731   Low
cufflinks 10.5809 0.0 32.1709   High
cufflinks 5.83645 0.0 16.4323    
cufflinks 6.77133 0.0 19.3936    
cufflinks 2.485        
cufflinks 1.399       Low
cufflinks 3.079       High
cufflinks 2.093        
cufflinks 2.533        
cufflinks 2.089        
cufflinks 2.131        
cufflinks 1.542       Low
cufflinks 2.947       High
cufflinks 3.378       High
cufflinks 2.344        
cufflinks 1.604       Low
cufflinks 2.485        
cufflinks 1.638       Low
cufflinks 1.595       Low
cufflinks 2.264        
cufflinks 2.418        

0 Strain