Gene : Glyma.11G033000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13402 - RGPR-RELATED Genomic Order:  330
Name:  ? Glyma.11G033000 Secondary Identifier:  ? PAC:30530443
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G033000 0.5kb upstream 0.5kb upstream 8055 true Chr11: 2405715-2413769 Glycine max
Glyma.11G033000 0.5kb upstream 0.5kb upstream 500 false Chr11: 2413270-2413769 Glycine max
Glyma.11G033000 0.5kb downstream 0.5kb downstream 8055 true Chr11: 2405215-2413269 Glycine max
Glyma.11G033000 0.5kb downstream 0.5kb downstream 500 false Chr11: 2405215-2405714 Glycine max
Glyma.11G033000 1.0kb upstream 1.0kb upstream 8555 true Chr11: 2405715-2414269 Glycine max
Glyma.11G033000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2413270-2414269 Glycine max
Glyma.11G033000 1.0kb downstream 1.0kb downstream 8555 true Chr11: 2404715-2413269 Glycine max
Glyma.11G033000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2404715-2405714 Glycine max
Glyma.11G033000 2.0kb upstream 2.0kb upstream 9555 true Chr11: 2405715-2415269 Glycine max
Glyma.11G033000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2413270-2415269 Glycine max
Glyma.11G033000 2.0kb downstream 2.0kb downstream 9555 true Chr11: 2403715-2413269 Glycine max
Glyma.11G033000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2403715-2405714 Glycine max
Glyma.11G033000 5.0kb upstream 5.0kb upstream 12555 true Chr11: 2405715-2418269 Glycine max
Glyma.11G033000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2413270-2418269 Glycine max
Glyma.11G033000 5.0kb downstream 5.0kb downstream 12555 true Chr11: 2400715-2413269 Glycine max
Glyma.11G033000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2400715-2405714 Glycine max
Glyma.11G033000 10.0kb upstream 10.0kb upstream 17555 true Chr11: 2405715-2423269 Glycine max
Glyma.11G033000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2413270-2423269 Glycine max
Glyma.11G033000 10.0kb downstream 10.0kb downstream 17555 true Chr11: 2395715-2413269 Glycine max
Glyma.11G033000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2395715-2405714 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301249 5265 Fabidae View MSA
124072884 5270 Rosid View MSA
123746128 5271 Pentapetalae View MSA
122793039 5272 Eudicot View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.18487 0.0 38.6658    
cufflinks 4.4675 0.0 24.0715   Low
cufflinks 7.11607 0.0 45.1352    
cufflinks 6.71173 0.0 40.074    
cufflinks 6.90839 0.0 36.6135    
cufflinks 7.76058 0.0 38.9816   High
cufflinks 6.6358 0.0 38.5978    
cufflinks 6.91487 0.0 42.1883    
cufflinks 6.21998 0.0 33.4584    
cufflinks 2.19        
cufflinks 1.644        
cufflinks 2.092        
cufflinks 2.547       High
cufflinks 2.34        
cufflinks 1.421       Low
cufflinks 1.681        
cufflinks 2.701       High
cufflinks 2.36        
cufflinks 2.129        
cufflinks 1.532       Low
cufflinks 1.648        
cufflinks 1.722        
cufflinks 2.094        
cufflinks 1.835        
cufflinks 1.37       Low
cufflinks 3.219       High

0 Strain