Gene : Glyma.11G034100 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  341
Name:  ? Glyma.11G034100 Secondary Identifier:  ? PAC:30528774
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G034100 0.5kb upstream 0.5kb upstream 6071 true Chr11: 2487645-2493715 Glycine max
Glyma.11G034100 0.5kb upstream 0.5kb upstream 500 false Chr11: 2493216-2493715 Glycine max
Glyma.11G034100 0.5kb downstream 0.5kb downstream 6071 true Chr11: 2487145-2493215 Glycine max
Glyma.11G034100 0.5kb downstream 0.5kb downstream 500 false Chr11: 2487145-2487644 Glycine max
Glyma.11G034100 1.0kb upstream 1.0kb upstream 6571 true Chr11: 2487645-2494215 Glycine max
Glyma.11G034100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2493216-2494215 Glycine max
Glyma.11G034100 1.0kb downstream 1.0kb downstream 6571 true Chr11: 2486645-2493215 Glycine max
Glyma.11G034100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2486645-2487644 Glycine max
Glyma.11G034100 2.0kb upstream 2.0kb upstream 7571 true Chr11: 2487645-2495215 Glycine max
Glyma.11G034100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2493216-2495215 Glycine max
Glyma.11G034100 2.0kb downstream 2.0kb downstream 7571 true Chr11: 2485645-2493215 Glycine max
Glyma.11G034100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2485645-2487644 Glycine max
Glyma.11G034100 5.0kb upstream 5.0kb upstream 10571 true Chr11: 2487645-2498215 Glycine max
Glyma.11G034100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2493216-2498215 Glycine max
Glyma.11G034100 5.0kb downstream 5.0kb downstream 10571 true Chr11: 2482645-2493215 Glycine max
Glyma.11G034100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2482645-2487644 Glycine max
Glyma.11G034100 10.0kb upstream 10.0kb upstream 15571 true Chr11: 2487645-2503215 Glycine max
Glyma.11G034100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2493216-2503215 Glycine max
Glyma.11G034100 10.0kb downstream 10.0kb downstream 15571 true Chr11: 2477645-2493215 Glycine max
Glyma.11G034100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2477645-2487644 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304884 5265 Fabidae View MSA
124066090 5270 Rosid View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8225 0.0 64.4071    
cufflinks 9.96001 0.0 38.1357    
cufflinks 6.05425 0.0 23.2526   Low
cufflinks 12.1674 0.0 47.5726    
cufflinks 16.3231 0.0 66.8099   High
cufflinks 6.54961 0.0 24.956   Low
cufflinks 19.269 0.0 81.9748   High
cufflinks 9.09261 0.0 34.7193    
cufflinks 9.88649 0.0 37.7915    
cufflinks 2.743        
cufflinks 3.419        
cufflinks 2.672        
cufflinks 4.66        
cufflinks 6.875     High High
cufflinks 6.757     High High
cufflinks 2.653        
cufflinks 2.273        
cufflinks 2.726        
cufflinks 4.096        
cufflinks 2.198       Low
cufflinks 4.874       High
cufflinks 2.373        
cufflinks 2.946        
cufflinks 2.248        
cufflinks 2.385        
cufflinks 3.279        

0 Strain