Gene : Glyma.11G034400 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  344
Name:  ? Glyma.11G034400 Secondary Identifier:  ? PAC:30527938
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G034400 0.5kb upstream 0.5kb upstream 3565 true Chr11: 2498410-2501974 Glycine max
Glyma.11G034400 0.5kb upstream 0.5kb upstream 500 false Chr11: 2501475-2501974 Glycine max
Glyma.11G034400 0.5kb downstream 0.5kb downstream 3565 true Chr11: 2497910-2501474 Glycine max
Glyma.11G034400 0.5kb downstream 0.5kb downstream 500 false Chr11: 2497910-2498409 Glycine max
Glyma.11G034400 1.0kb upstream 1.0kb upstream 4065 true Chr11: 2498410-2502474 Glycine max
Glyma.11G034400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2501475-2502474 Glycine max
Glyma.11G034400 1.0kb downstream 1.0kb downstream 4065 true Chr11: 2497410-2501474 Glycine max
Glyma.11G034400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2497410-2498409 Glycine max
Glyma.11G034400 2.0kb upstream 2.0kb upstream 5065 true Chr11: 2498410-2503474 Glycine max
Glyma.11G034400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2501475-2503474 Glycine max
Glyma.11G034400 2.0kb downstream 2.0kb downstream 5065 true Chr11: 2496410-2501474 Glycine max
Glyma.11G034400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2496410-2498409 Glycine max
Glyma.11G034400 5.0kb upstream 5.0kb upstream 8065 true Chr11: 2498410-2506474 Glycine max
Glyma.11G034400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2501475-2506474 Glycine max
Glyma.11G034400 5.0kb downstream 5.0kb downstream 8065 true Chr11: 2493410-2501474 Glycine max
Glyma.11G034400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2493410-2498409 Glycine max
Glyma.11G034400 10.0kb upstream 10.0kb upstream 13065 true Chr11: 2498410-2511474 Glycine max
Glyma.11G034400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2501475-2511474 Glycine max
Glyma.11G034400 10.0kb downstream 10.0kb downstream 13065 true Chr11: 2488410-2501474 Glycine max
Glyma.11G034400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2488410-2498409 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301283 5265 Fabidae View MSA
124050253 5270 Rosid View MSA
123741992 5271 Pentapetalae View MSA
122794510 5272 Eudicot View MSA
122048590 5273 Angiosperm View MSA
121311030 5274 Embryophyte View MSA
123348384 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.556676 0.0 2.0495   Low
cufflinks 0.903416 0.0 3.22986    
cufflinks 5.45104 0.0 15.724   High
cufflinks 8.52862 0.0 23.4618   High
cufflinks 1.17881 0.0 4.11976    
cufflinks 0.583968 0.0 2.14379   Low
cufflinks 1.96265 0.0 6.50221    
cufflinks 5.98479 0.0 17.0623   High
cufflinks 1.56005 0.0 5.31257    
cufflinks 7.278       High
cufflinks 4.014        
cufflinks 3.062        
cufflinks 0.689       Low
cufflinks 0.625       Low
cufflinks 6.143     High High
cufflinks 1.621        
cufflinks 5.006       High
cufflinks 1.552        
cufflinks 0.523       Low
cufflinks 1.677        
cufflinks 2.66        
cufflinks 1.253        
cufflinks 0.891        
cufflinks 1.16        
cufflinks 1.92        
cufflinks 2.004        

0 Strain