Gene : Glyma.11G079200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11099 - VACUOLAR SORTING PROTEIN 35 Genomic Order:  792
Name:  ? Glyma.11G079200 Secondary Identifier:  ? PAC:30527776
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G079200 0.5kb upstream 0.5kb upstream 9497 true Chr11: 5946944-5956440 Glycine max
Glyma.11G079200 0.5kb upstream 0.5kb upstream 500 false Chr11: 5955941-5956440 Glycine max
Glyma.11G079200 0.5kb downstream 0.5kb downstream 9497 true Chr11: 5946444-5955940 Glycine max
Glyma.11G079200 0.5kb downstream 0.5kb downstream 500 false Chr11: 5946444-5946943 Glycine max
Glyma.11G079200 1.0kb upstream 1.0kb upstream 9997 true Chr11: 5946944-5956940 Glycine max
Glyma.11G079200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5955941-5956940 Glycine max
Glyma.11G079200 1.0kb downstream 1.0kb downstream 9997 true Chr11: 5945944-5955940 Glycine max
Glyma.11G079200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5945944-5946943 Glycine max
Glyma.11G079200 2.0kb upstream 2.0kb upstream 10997 true Chr11: 5946944-5957940 Glycine max
Glyma.11G079200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5955941-5957940 Glycine max
Glyma.11G079200 2.0kb downstream 2.0kb downstream 10997 true Chr11: 5944944-5955940 Glycine max
Glyma.11G079200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5944944-5946943 Glycine max
Glyma.11G079200 5.0kb upstream 5.0kb upstream 13997 true Chr11: 5946944-5960940 Glycine max
Glyma.11G079200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5955941-5960940 Glycine max
Glyma.11G079200 5.0kb downstream 5.0kb downstream 13997 true Chr11: 5941944-5955940 Glycine max
Glyma.11G079200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5941944-5946943 Glycine max
Glyma.11G079200 10.0kb upstream 10.0kb upstream 18997 true Chr11: 5946944-5965940 Glycine max
Glyma.11G079200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5955941-5965940 Glycine max
Glyma.11G079200 10.0kb downstream 10.0kb downstream 18997 true Chr11: 5936944-5955940 Glycine max
Glyma.11G079200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5936944-5946943 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312645 5265 Fabidae View MSA
124070989 5270 Rosid View MSA
123744286 5271 Pentapetalae View MSA
122786661 5272 Eudicot View MSA
122044780 5273 Angiosperm View MSA
121345566 5274 Embryophyte View MSA
123426785 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.9945 0.0 69.0692    
cufflinks 14.9063 0.0 53.4848    
cufflinks 21.6977 0.0 72.9916 High High
cufflinks 17.2033 0.0 63.2005    
cufflinks 15.9257 0.0 57.0726    
cufflinks 14.5229 0.0 47.765   Low
cufflinks 17.9026 0.0 65.4723    
cufflinks 15.2418 0.0 48.4859    
cufflinks 15.0455 0.0 54.9742    
cufflinks 2.965        
cufflinks 2.628        
cufflinks 4.111       High
cufflinks 3.408        
cufflinks 3.653       High
cufflinks 2.669        
cufflinks 2.974        
cufflinks 2.42       Low
cufflinks 4.3       High
cufflinks 3.602       High
cufflinks 2.616        
cufflinks 2.684        
cufflinks 2.927        
cufflinks 2.664        
cufflinks 2.761        
cufflinks 2.611        
cufflinks 2.712        

0 Strain