Gene : Glyma.11G082000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15160//PTHR15160:SF6 - VON HIPPEL-LINDAU PROTEIN Genomic Order:  820
Name:  ? Glyma.11G082000 Secondary Identifier:  ? PAC:30529890
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G082000 0.5kb upstream 0.5kb upstream 3426 true Chr11: 6155146-6158571 Glycine max
Glyma.11G082000 0.5kb upstream 0.5kb upstream 500 false Chr11: 6155146-6155645 Glycine max
Glyma.11G082000 0.5kb downstream 0.5kb downstream 3426 true Chr11: 6155646-6159071 Glycine max
Glyma.11G082000 0.5kb downstream 0.5kb downstream 500 false Chr11: 6158572-6159071 Glycine max
Glyma.11G082000 1.0kb upstream 1.0kb upstream 3926 true Chr11: 6154646-6158571 Glycine max
Glyma.11G082000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6154646-6155645 Glycine max
Glyma.11G082000 1.0kb downstream 1.0kb downstream 3926 true Chr11: 6155646-6159571 Glycine max
Glyma.11G082000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6158572-6159571 Glycine max
Glyma.11G082000 2.0kb upstream 2.0kb upstream 4926 true Chr11: 6153646-6158571 Glycine max
Glyma.11G082000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6153646-6155645 Glycine max
Glyma.11G082000 2.0kb downstream 2.0kb downstream 4926 true Chr11: 6155646-6160571 Glycine max
Glyma.11G082000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6158572-6160571 Glycine max
Glyma.11G082000 5.0kb upstream 5.0kb upstream 7926 true Chr11: 6150646-6158571 Glycine max
Glyma.11G082000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6150646-6155645 Glycine max
Glyma.11G082000 5.0kb downstream 5.0kb downstream 7926 true Chr11: 6155646-6163571 Glycine max
Glyma.11G082000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6158572-6163571 Glycine max
Glyma.11G082000 10.0kb upstream 10.0kb upstream 12926 true Chr11: 6145646-6158571 Glycine max
Glyma.11G082000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6145646-6155645 Glycine max
Glyma.11G082000 10.0kb downstream 10.0kb downstream 12926 true Chr11: 6155646-6168571 Glycine max
Glyma.11G082000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6158572-6168571 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301594 5265 Fabidae View MSA
124070862 5270 Rosid View MSA
123741334 5271 Pentapetalae View MSA
122787015 5272 Eudicot View MSA
122043801 5273 Angiosperm View MSA
121348227 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.49108 0.0 21.1658    
cufflinks 7.67233 0.0 26.7199    
cufflinks 4.56538 0.0 18.6176    
cufflinks 11.9124 0.0 37.6326   High
cufflinks 5.41097 0.0 20.875    
cufflinks 4.32738 0.0 17.9792    
cufflinks 5.56128 0.0 21.5506    
cufflinks 8.73745 0.0 29.5258   High
cufflinks 3.90655 0.0 16.843   Low
cufflinks 1.767        
cufflinks 1.135        
cufflinks 1.322        
cufflinks 1.109        
cufflinks 0.998        
cufflinks 0.956       Low
cufflinks 1.663        
cufflinks 1.309        
cufflinks 1.853        
cufflinks 1.505        
cufflinks 1.846        
cufflinks 1.276        
cufflinks 1.706        
cufflinks 1.165        
cufflinks 0.577       Low
cufflinks 1.682        
cufflinks 2.249       High

0 Strain