Gene : Glyma.11G082600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR22883:SF33 - PALMITOYLTRANSFERASE ZDHHC12-RELATED Genomic Order:  826
Name:  ? Glyma.11G082600 Secondary Identifier:  ? PAC:30531243
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G082600 0.5kb upstream 0.5kb upstream 6622 true Chr11: 6203317-6209938 Glycine max
Glyma.11G082600 0.5kb upstream 0.5kb upstream 500 false Chr11: 6203317-6203816 Glycine max
Glyma.11G082600 0.5kb downstream 0.5kb downstream 6622 true Chr11: 6203817-6210438 Glycine max
Glyma.11G082600 0.5kb downstream 0.5kb downstream 500 false Chr11: 6209939-6210438 Glycine max
Glyma.11G082600 1.0kb upstream 1.0kb upstream 7122 true Chr11: 6202817-6209938 Glycine max
Glyma.11G082600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6202817-6203816 Glycine max
Glyma.11G082600 1.0kb downstream 1.0kb downstream 7122 true Chr11: 6203817-6210938 Glycine max
Glyma.11G082600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6209939-6210938 Glycine max
Glyma.11G082600 2.0kb upstream 2.0kb upstream 8122 true Chr11: 6201817-6209938 Glycine max
Glyma.11G082600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6201817-6203816 Glycine max
Glyma.11G082600 2.0kb downstream 2.0kb downstream 8122 true Chr11: 6203817-6211938 Glycine max
Glyma.11G082600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6209939-6211938 Glycine max
Glyma.11G082600 5.0kb upstream 5.0kb upstream 11122 true Chr11: 6198817-6209938 Glycine max
Glyma.11G082600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6198817-6203816 Glycine max
Glyma.11G082600 5.0kb downstream 5.0kb downstream 11122 true Chr11: 6203817-6214938 Glycine max
Glyma.11G082600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6209939-6214938 Glycine max
Glyma.11G082600 10.0kb upstream 10.0kb upstream 16122 true Chr11: 6193817-6209938 Glycine max
Glyma.11G082600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6193817-6203816 Glycine max
Glyma.11G082600 10.0kb downstream 10.0kb downstream 16122 true Chr11: 6203817-6219938 Glycine max
Glyma.11G082600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6209939-6219938 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304055 5265 Fabidae View MSA
124066759 5270 Rosid View MSA
123743481 5271 Pentapetalae View MSA
122785715 5272 Eudicot View MSA
122045907 5273 Angiosperm View MSA
123428988 5275 Viridiplantae View MSA
121350860 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.8485 0.0 53.0166    
cufflinks 12.0338 0.0 32.2949   Low
cufflinks 20.052 0.0 53.5832    
cufflinks 16.5473 0.0 44.1471    
cufflinks 14.3342 0.0 38.2965    
cufflinks 17.3026 0.0 46.1638    
cufflinks 22.2544 0.0 59.5697 High High
cufflinks 17.4995 0.0 46.6888    
cufflinks 13.8053 0.0 36.9069    
cufflinks 4.871        
cufflinks 4.789        
cufflinks 5.058        
cufflinks 3.633       Low
cufflinks 4.343        
cufflinks 3.112       Low
cufflinks 4.463        
cufflinks 4.611        
cufflinks 4.531        
cufflinks 3.965        
cufflinks 4.906        
cufflinks 5.619       High
cufflinks 4.717        
cufflinks 3.487       Low
cufflinks 5.666       High
cufflinks 4.423        
cufflinks 5.272        

0 Strain