Gene : Glyma.11G083600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10629:SF30 - DNA (CYTOSINE-5)-METHYLTRANSFERASE CMT1-RELATED Genomic Order:  836
Name:  ? Glyma.11G083600 Secondary Identifier:  ? PAC:30531071
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G083600 0.5kb upstream 0.5kb upstream 12947 true Chr11: 6265374-6278320 Glycine max
Glyma.11G083600 0.5kb upstream 0.5kb upstream 500 false Chr11: 6277821-6278320 Glycine max
Glyma.11G083600 0.5kb downstream 0.5kb downstream 12947 true Chr11: 6264874-6277820 Glycine max
Glyma.11G083600 0.5kb downstream 0.5kb downstream 500 false Chr11: 6264874-6265373 Glycine max
Glyma.11G083600 1.0kb upstream 1.0kb upstream 13447 true Chr11: 6265374-6278820 Glycine max
Glyma.11G083600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6277821-6278820 Glycine max
Glyma.11G083600 1.0kb downstream 1.0kb downstream 13447 true Chr11: 6264374-6277820 Glycine max
Glyma.11G083600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6264374-6265373 Glycine max
Glyma.11G083600 2.0kb upstream 2.0kb upstream 14447 true Chr11: 6265374-6279820 Glycine max
Glyma.11G083600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6277821-6279820 Glycine max
Glyma.11G083600 2.0kb downstream 2.0kb downstream 14447 true Chr11: 6263374-6277820 Glycine max
Glyma.11G083600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6263374-6265373 Glycine max
Glyma.11G083600 5.0kb upstream 5.0kb upstream 17447 true Chr11: 6265374-6282820 Glycine max
Glyma.11G083600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6277821-6282820 Glycine max
Glyma.11G083600 5.0kb downstream 5.0kb downstream 17447 true Chr11: 6260374-6277820 Glycine max
Glyma.11G083600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6260374-6265373 Glycine max
Glyma.11G083600 10.0kb upstream 10.0kb upstream 22447 true Chr11: 6265374-6287820 Glycine max
Glyma.11G083600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6277821-6287820 Glycine max
Glyma.11G083600 10.0kb downstream 10.0kb downstream 22447 true Chr11: 6255374-6277820 Glycine max
Glyma.11G083600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6255374-6265373 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297560 5265 Fabidae View MSA
124071027 5270 Rosid View MSA
123743070 5271 Pentapetalae View MSA
122794759 5272 Eudicot View MSA
122046536 5273 Angiosperm View MSA
121345495 5274 Embryophyte View MSA
123428443 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.20694 0.0 1.45315 Low Low
cufflinks 4.65344 0.0 19.9882   High
cufflinks 0.634654 0.0 3.49248    
cufflinks 1.40537 0.0 4.80539    
cufflinks 2.58406 0.0 13.0232    
cufflinks 0.814741 0.0 3.25732    
cufflinks 2.15566 0.0 6.52834    
cufflinks 1.39181 0.0 6.31474    
cufflinks 2.8442 0.0 13.5951    
cufflinks 0.151        
cufflinks 0.029     Low Low
cufflinks 0.122        
cufflinks 0.21        
cufflinks 0.264        
cufflinks 0.023     Low Low
cufflinks 0.36        
cufflinks 0.055     Low  
cufflinks 0.087     Low  
cufflinks 0.569       High
cufflinks 0.258        
cufflinks 0.05     Low  
cufflinks 0.329        
cufflinks 0.52       High
cufflinks 0.025     Low Low
cufflinks 0.262        
cufflinks 0.08        

0 Strain