Gene : Glyma.11G071400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11247:SF25 - LIPID PHOSPHATE PHOSPHATASE EPSILON 1, CHLOROPLASTIC-RELATED Genomic Order:  714
Name:  ? Glyma.11G071400 Secondary Identifier:  ? PAC:30528923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRIGLSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G071400 0.5kb upstream 0.5kb upstream 4738 true Chr11: 5323996-5328733 Glycine max
Glyma.11G071400 0.5kb upstream 0.5kb upstream 500 false Chr11: 5328234-5328733 Glycine max
Glyma.11G071400 0.5kb downstream 0.5kb downstream 4738 true Chr11: 5323496-5328233 Glycine max
Glyma.11G071400 0.5kb downstream 0.5kb downstream 500 false Chr11: 5323496-5323995 Glycine max
Glyma.11G071400 1.0kb upstream 1.0kb upstream 5238 true Chr11: 5323996-5329233 Glycine max
Glyma.11G071400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5328234-5329233 Glycine max
Glyma.11G071400 1.0kb downstream 1.0kb downstream 5238 true Chr11: 5322996-5328233 Glycine max
Glyma.11G071400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5322996-5323995 Glycine max
Glyma.11G071400 2.0kb upstream 2.0kb upstream 6238 true Chr11: 5323996-5330233 Glycine max
Glyma.11G071400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5328234-5330233 Glycine max
Glyma.11G071400 2.0kb downstream 2.0kb downstream 6238 true Chr11: 5321996-5328233 Glycine max
Glyma.11G071400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5321996-5323995 Glycine max
Glyma.11G071400 5.0kb upstream 5.0kb upstream 9238 true Chr11: 5323996-5333233 Glycine max
Glyma.11G071400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5328234-5333233 Glycine max
Glyma.11G071400 5.0kb downstream 5.0kb downstream 9238 true Chr11: 5318996-5328233 Glycine max
Glyma.11G071400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5318996-5323995 Glycine max
Glyma.11G071400 10.0kb upstream 10.0kb upstream 14238 true Chr11: 5323996-5338233 Glycine max
Glyma.11G071400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5328234-5338233 Glycine max
Glyma.11G071400 10.0kb downstream 10.0kb downstream 14238 true Chr11: 5313996-5328233 Glycine max
Glyma.11G071400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5313996-5323995 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308854 5265 Fabidae View MSA
124066688 5270 Rosid View MSA
123737697 5271 Pentapetalae View MSA
122792032 5272 Eudicot View MSA
122049888 5273 Angiosperm View MSA
121311632 5274 Embryophyte View MSA
123426780 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.7218 0.0 116.766 High High
cufflinks 7.07214 0.0 28.732    
cufflinks 6.09175 0.0 22.1386    
cufflinks 4.05854 0.0 17.0653    
cufflinks 4.64297 0.0 18.5045    
cufflinks 8.71628 0.0 33.3194    
cufflinks 2.12227 0.0 11.1285   Low
cufflinks 4.39296 0.0 18.4478    
cufflinks 4.53859 0.0 18.1934    
cufflinks 1.257        
cufflinks 0.384       Low
cufflinks 1.111        
cufflinks 1.359        
cufflinks 0.608        
cufflinks 0.22       Low
cufflinks 1.367        
cufflinks 7.496     High High
cufflinks 0.844        
cufflinks 1.102        
cufflinks 1.353        
cufflinks 0.498        
cufflinks 1.532        
cufflinks 1.97        
cufflinks 0.622        
cufflinks 1.477        
cufflinks 0.837        

0 Strain