Gene : Glyma.11G071700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23070//PTHR23070:SF12 - BCS1 AAA-TYPE ATPASE Genomic Order:  717
Name:  ? Glyma.11G071700 Secondary Identifier:  ? PAC:30529585
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G071700 0.5kb upstream 0.5kb upstream 2665 true Chr11: 5352639-5355303 Glycine max
Glyma.11G071700 0.5kb upstream 0.5kb upstream 500 false Chr11: 5352639-5353138 Glycine max
Glyma.11G071700 0.5kb downstream 0.5kb downstream 2665 true Chr11: 5353139-5355803 Glycine max
Glyma.11G071700 0.5kb downstream 0.5kb downstream 500 false Chr11: 5355304-5355803 Glycine max
Glyma.11G071700 1.0kb upstream 1.0kb upstream 3165 true Chr11: 5352139-5355303 Glycine max
Glyma.11G071700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5352139-5353138 Glycine max
Glyma.11G071700 1.0kb downstream 1.0kb downstream 3165 true Chr11: 5353139-5356303 Glycine max
Glyma.11G071700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5355304-5356303 Glycine max
Glyma.11G071700 2.0kb upstream 2.0kb upstream 4165 true Chr11: 5351139-5355303 Glycine max
Glyma.11G071700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5351139-5353138 Glycine max
Glyma.11G071700 2.0kb downstream 2.0kb downstream 4165 true Chr11: 5353139-5357303 Glycine max
Glyma.11G071700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5355304-5357303 Glycine max
Glyma.11G071700 5.0kb upstream 5.0kb upstream 7165 true Chr11: 5348139-5355303 Glycine max
Glyma.11G071700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5348139-5353138 Glycine max
Glyma.11G071700 5.0kb downstream 5.0kb downstream 7165 true Chr11: 5353139-5360303 Glycine max
Glyma.11G071700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5355304-5360303 Glycine max
Glyma.11G071700 10.0kb upstream 10.0kb upstream 12165 true Chr11: 5343139-5355303 Glycine max
Glyma.11G071700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5343139-5353138 Glycine max
Glyma.11G071700 10.0kb downstream 10.0kb downstream 12165 true Chr11: 5353139-5365303 Glycine max
Glyma.11G071700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5355304-5365303 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657512 5273 Angiosperm View MSA
122297410 5265 Fabidae View MSA
124039441 5270 Rosid View MSA
123611319 5271 Pentapetalae View MSA
122645890 5272 Eudicot View MSA
120929553 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.41348 0.0 25.639    
cufflinks 11.9715 0.0 32.1956    
cufflinks 20.3886 0.0 54.4528 High  
cufflinks 18.6721 0.0 49.8239    
cufflinks 17.9974 0.0 48.0153    
cufflinks 5.49622 0.0 15.7159   Low
cufflinks 5.2644 0.0 15.1422   Low
cufflinks 15.6675 0.0 41.8225    
cufflinks 37.4866 0.0 103.086 High High
cufflinks 24.357     High High
cufflinks 14.632     High  
cufflinks 25.036     High High
cufflinks 15.147     High  
cufflinks 16.617     High  
cufflinks 8.252     High  
cufflinks 12.746     High  
cufflinks 6.696     High Low
cufflinks 21.806     High High
cufflinks 9.991     High  
cufflinks 10.122     High  
cufflinks 6.682     High Low
cufflinks 11.518     High  
cufflinks 6.711       Low
cufflinks 12.571     High  
cufflinks 10.368     High  
cufflinks 12.54     High  

0 Strain