Gene : Glyma.11G071800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23070//PTHR23070:SF12 - BCS1 AAA-TYPE ATPASE Genomic Order:  718
Name:  ? Glyma.11G071800 Secondary Identifier:  ? PAC:30528520
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G071800 0.5kb upstream 0.5kb upstream 2393 true Chr11: 5358782-5361174 Glycine max
Glyma.11G071800 0.5kb upstream 0.5kb upstream 500 false Chr11: 5358782-5359281 Glycine max
Glyma.11G071800 0.5kb downstream 0.5kb downstream 2393 true Chr11: 5359282-5361674 Glycine max
Glyma.11G071800 0.5kb downstream 0.5kb downstream 500 false Chr11: 5361175-5361674 Glycine max
Glyma.11G071800 1.0kb upstream 1.0kb upstream 2893 true Chr11: 5358282-5361174 Glycine max
Glyma.11G071800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5358282-5359281 Glycine max
Glyma.11G071800 1.0kb downstream 1.0kb downstream 2893 true Chr11: 5359282-5362174 Glycine max
Glyma.11G071800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5361175-5362174 Glycine max
Glyma.11G071800 2.0kb upstream 2.0kb upstream 3893 true Chr11: 5357282-5361174 Glycine max
Glyma.11G071800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5357282-5359281 Glycine max
Glyma.11G071800 2.0kb downstream 2.0kb downstream 3893 true Chr11: 5359282-5363174 Glycine max
Glyma.11G071800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5361175-5363174 Glycine max
Glyma.11G071800 5.0kb upstream 5.0kb upstream 6893 true Chr11: 5354282-5361174 Glycine max
Glyma.11G071800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5354282-5359281 Glycine max
Glyma.11G071800 5.0kb downstream 5.0kb downstream 6893 true Chr11: 5359282-5366174 Glycine max
Glyma.11G071800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5361175-5366174 Glycine max
Glyma.11G071800 10.0kb upstream 10.0kb upstream 11893 true Chr11: 5349282-5361174 Glycine max
Glyma.11G071800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5349282-5359281 Glycine max
Glyma.11G071800 10.0kb downstream 10.0kb downstream 11893 true Chr11: 5359282-5371174 Glycine max
Glyma.11G071800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5361175-5371174 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657512 5273 Angiosperm View MSA
122255315 5265 Fabidae View MSA
124039441 5270 Rosid View MSA
123611319 5271 Pentapetalae View MSA
122645890 5272 Eudicot View MSA
120929553 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0242073 0.0 0.103159 Low  
cufflinks 0.139246 0.0 0.544136 Low  
cufflinks 0.00742455 0.0 0.0351273 Low Low
cufflinks 0.0710873 0.0 0.284612 Low  
cufflinks 1.62711 0.0 5.4827   High
cufflinks 0.721321 0.0 2.60769    
cufflinks 0.0640926 0.0 0.257939 Low  
cufflinks 0.248113 0.0 0.945834    
cufflinks 4.51437 0.0 13.2051   High
cufflinks 0.319        
cufflinks 0.155        
cufflinks 0.043     Low  
cufflinks 1.769       High
cufflinks 3.976       High
cufflinks 0.149        
cufflinks 0.111        
cufflinks 0.179        
cufflinks 0.044     Low  
cufflinks 0.071     Low  
cufflinks 0.02     Low Low
cufflinks 0.198        
cufflinks 0.022     Low Low
cufflinks 0.038     Low  
cufflinks 0.148        
cufflinks 0.043     Low  
cufflinks 0.439        

0 Strain