Gene : Glyma.11G072200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10168:SF116 - GLUTAREDOXIN-C3 Genomic Order:  722
Name:  ? Glyma.11G072200 Secondary Identifier:  ? PAC:30529104
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G072200 0.5kb upstream 0.5kb upstream 1968 true Chr11: 5385664-5387631 Glycine max
Glyma.11G072200 0.5kb upstream 0.5kb upstream 500 false Chr11: 5385664-5386163 Glycine max
Glyma.11G072200 0.5kb downstream 0.5kb downstream 1968 true Chr11: 5386164-5388131 Glycine max
Glyma.11G072200 0.5kb downstream 0.5kb downstream 500 false Chr11: 5387632-5388131 Glycine max
Glyma.11G072200 1.0kb upstream 1.0kb upstream 2468 true Chr11: 5385164-5387631 Glycine max
Glyma.11G072200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5385164-5386163 Glycine max
Glyma.11G072200 1.0kb downstream 1.0kb downstream 2468 true Chr11: 5386164-5388631 Glycine max
Glyma.11G072200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5387632-5388631 Glycine max
Glyma.11G072200 2.0kb upstream 2.0kb upstream 3468 true Chr11: 5384164-5387631 Glycine max
Glyma.11G072200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5384164-5386163 Glycine max
Glyma.11G072200 2.0kb downstream 2.0kb downstream 3468 true Chr11: 5386164-5389631 Glycine max
Glyma.11G072200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5387632-5389631 Glycine max
Glyma.11G072200 5.0kb upstream 5.0kb upstream 6468 true Chr11: 5381164-5387631 Glycine max
Glyma.11G072200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5381164-5386163 Glycine max
Glyma.11G072200 5.0kb downstream 5.0kb downstream 6468 true Chr11: 5386164-5392631 Glycine max
Glyma.11G072200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5387632-5392631 Glycine max
Glyma.11G072200 10.0kb upstream 10.0kb upstream 11468 true Chr11: 5376164-5387631 Glycine max
Glyma.11G072200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5376164-5386163 Glycine max
Glyma.11G072200 10.0kb downstream 10.0kb downstream 11468 true Chr11: 5386164-5397631 Glycine max
Glyma.11G072200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5387632-5397631 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297294 5265 Fabidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9136 0.0 49.8586    
cufflinks 10.6045 0.0 31.2895    
cufflinks 13.8126 0.0 39.371    
cufflinks 8.61288 0.0 26.1838   Low
cufflinks 11.9715 0.0 34.7869    
cufflinks 23.9404 0.0 65.124 High High
cufflinks 10.3603 0.0 30.7997    
cufflinks 17.8964 0.0 49.7708    
cufflinks 12.2823 0.0 35.5503    
cufflinks 7.642     High High
cufflinks 4.857        
cufflinks 6.402        
cufflinks 6.909        
cufflinks 7.94     High High
cufflinks 2.614       Low
cufflinks 5.252        
cufflinks 6.483     High  
cufflinks 6.878        
cufflinks 6.51        
cufflinks 4.505        
cufflinks 3.92       Low
cufflinks 5.546        
cufflinks 5.343        
cufflinks 8.066     High High
cufflinks 4.383        
cufflinks 4.631        

0 Strain