Gene : Glyma.11G073700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945:SF173 - MADS-BOX FAMILY PROTEIN Genomic Order:  737
Name:  ? Glyma.11G073700 Secondary Identifier:  ? PAC:30530364
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G073700 0.5kb upstream 0.5kb upstream 3571 true Chr11: 5499478-5503048 Glycine max
Glyma.11G073700 0.5kb upstream 0.5kb upstream 500 false Chr11: 5499478-5499977 Glycine max
Glyma.11G073700 0.5kb downstream 0.5kb downstream 3571 true Chr11: 5499978-5503548 Glycine max
Glyma.11G073700 0.5kb downstream 0.5kb downstream 500 false Chr11: 5503049-5503548 Glycine max
Glyma.11G073700 1.0kb upstream 1.0kb upstream 4071 true Chr11: 5498978-5503048 Glycine max
Glyma.11G073700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5498978-5499977 Glycine max
Glyma.11G073700 1.0kb downstream 1.0kb downstream 4071 true Chr11: 5499978-5504048 Glycine max
Glyma.11G073700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5503049-5504048 Glycine max
Glyma.11G073700 2.0kb upstream 2.0kb upstream 5071 true Chr11: 5497978-5503048 Glycine max
Glyma.11G073700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5497978-5499977 Glycine max
Glyma.11G073700 2.0kb downstream 2.0kb downstream 5071 true Chr11: 5499978-5505048 Glycine max
Glyma.11G073700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5503049-5505048 Glycine max
Glyma.11G073700 5.0kb upstream 5.0kb upstream 8071 true Chr11: 5494978-5503048 Glycine max
Glyma.11G073700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5494978-5499977 Glycine max
Glyma.11G073700 5.0kb downstream 5.0kb downstream 8071 true Chr11: 5499978-5508048 Glycine max
Glyma.11G073700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5503049-5508048 Glycine max
Glyma.11G073700 10.0kb upstream 10.0kb upstream 13071 true Chr11: 5489978-5503048 Glycine max
Glyma.11G073700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5489978-5499977 Glycine max
Glyma.11G073700 10.0kb downstream 10.0kb downstream 13071 true Chr11: 5499978-5513048 Glycine max
Glyma.11G073700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5503049-5513048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310470 5265 Fabidae View MSA
124071528 5270 Rosid View MSA
123747185 5271 Pentapetalae View MSA
122794431 5272 Eudicot View MSA
122047951 5273 Angiosperm View MSA
121310821 5274 Embryophyte View MSA
123348212 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.17964 0.0 6.86904    
cufflinks 17.9696 0.0 62.2924   High
cufflinks 0.425014 0.0 2.84135    
cufflinks 0.210755 0.0 0.82464 Low  
cufflinks 0.330031 0.0 1.67012    
cufflinks 0.491069 0.0 3.20579    
cufflinks 0.273465 0.0 1.33396    
cufflinks 0.450398 0.0 2.2765    
cufflinks 0.005     Low  
cufflinks 0.018     Low  
cufflinks 5.293       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.358        
cufflinks 0.021     Low  
cufflinks 0.042     Low  
cufflinks 20.418     High High
cufflinks 0.209        
cufflinks 0.023     Low  
cufflinks 0.037     Low  
cufflinks 0.012     Low  
cufflinks 0.012     Low  
cufflinks 0.019     Low  
cufflinks 0.007     Low  
cufflinks 0.038     Low  

0 Strain