Gene : Glyma.11G076700 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG3149 - Transcription initiation factor IIF, auxiliary subunit Genomic Order:  767
Name:  ? Glyma.11G076700 Secondary Identifier:  ? PAC:30528743
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G076700 0.5kb upstream 0.5kb upstream 3153 true Chr11: 5740603-5743755 Glycine max
Glyma.11G076700 0.5kb upstream 0.5kb upstream 500 false Chr11: 5740603-5741102 Glycine max
Glyma.11G076700 0.5kb downstream 0.5kb downstream 3153 true Chr11: 5741103-5744255 Glycine max
Glyma.11G076700 0.5kb downstream 0.5kb downstream 500 false Chr11: 5743756-5744255 Glycine max
Glyma.11G076700 1.0kb upstream 1.0kb upstream 3653 true Chr11: 5740103-5743755 Glycine max
Glyma.11G076700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5740103-5741102 Glycine max
Glyma.11G076700 1.0kb downstream 1.0kb downstream 3653 true Chr11: 5741103-5744755 Glycine max
Glyma.11G076700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5743756-5744755 Glycine max
Glyma.11G076700 2.0kb upstream 2.0kb upstream 4653 true Chr11: 5739103-5743755 Glycine max
Glyma.11G076700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5739103-5741102 Glycine max
Glyma.11G076700 2.0kb downstream 2.0kb downstream 4653 true Chr11: 5741103-5745755 Glycine max
Glyma.11G076700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5743756-5745755 Glycine max
Glyma.11G076700 5.0kb upstream 5.0kb upstream 7653 true Chr11: 5736103-5743755 Glycine max
Glyma.11G076700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5736103-5741102 Glycine max
Glyma.11G076700 5.0kb downstream 5.0kb downstream 7653 true Chr11: 5741103-5748755 Glycine max
Glyma.11G076700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5743756-5748755 Glycine max
Glyma.11G076700 10.0kb upstream 10.0kb upstream 12653 true Chr11: 5731103-5743755 Glycine max
Glyma.11G076700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5731103-5741102 Glycine max
Glyma.11G076700 10.0kb downstream 10.0kb downstream 12653 true Chr11: 5741103-5753755 Glycine max
Glyma.11G076700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5743756-5753755 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301473 5265 Fabidae View MSA
124070032 5270 Rosid View MSA
123737599 5271 Pentapetalae View MSA
122789649 5272 Eudicot View MSA
122044326 5273 Angiosperm View MSA
121346764 5274 Embryophyte View MSA
123428525 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6877 0.0 29.7399    
cufflinks 11.3369 0.0 31.3734   High
cufflinks 10.1543 0.0 28.3653    
cufflinks 8.57488 0.0 24.3726    
cufflinks 7.68567 0.0 22.1488   Low
cufflinks 8.86366 0.0 25.0866    
cufflinks 10.0106 0.0 28.0587    
cufflinks 9.89462 0.0 27.6983    
cufflinks 9.67284 0.0 27.1492    
cufflinks 3.609       Low
cufflinks 3.367       Low
cufflinks 4.827        
cufflinks 4.555        
cufflinks 4.477        
cufflinks 3.342       Low
cufflinks 5.94       High
cufflinks 4.064        
cufflinks 4.742        
cufflinks 6.59       High
cufflinks 5.281        
cufflinks 3.597       Low
cufflinks 5.897       High
cufflinks 6.59       High
cufflinks 3.674        
cufflinks 5.629        
cufflinks 4.003        

0 Strain