Gene : Glyma.11G062900 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10292 - CLATHRIN HEAVY CHAIN Genomic Order:  629
Name:  ? Glyma.11G062900 Secondary Identifier:  ? PAC:30529214
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G062900 0.5kb upstream 0.5kb upstream 12958 true Chr11: 4763004-4775961 Glycine max
Glyma.11G062900 0.5kb upstream 0.5kb upstream 500 false Chr11: 4775462-4775961 Glycine max
Glyma.11G062900 0.5kb downstream 0.5kb downstream 12958 true Chr11: 4762504-4775461 Glycine max
Glyma.11G062900 0.5kb downstream 0.5kb downstream 500 false Chr11: 4762504-4763003 Glycine max
Glyma.11G062900 1.0kb upstream 1.0kb upstream 13458 true Chr11: 4763004-4776461 Glycine max
Glyma.11G062900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4775462-4776461 Glycine max
Glyma.11G062900 1.0kb downstream 1.0kb downstream 13458 true Chr11: 4762004-4775461 Glycine max
Glyma.11G062900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4762004-4763003 Glycine max
Glyma.11G062900 2.0kb upstream 2.0kb upstream 14458 true Chr11: 4763004-4777461 Glycine max
Glyma.11G062900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4775462-4777461 Glycine max
Glyma.11G062900 2.0kb downstream 2.0kb downstream 14458 true Chr11: 4761004-4775461 Glycine max
Glyma.11G062900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4761004-4763003 Glycine max
Glyma.11G062900 5.0kb upstream 5.0kb upstream 17458 true Chr11: 4763004-4780461 Glycine max
Glyma.11G062900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4775462-4780461 Glycine max
Glyma.11G062900 5.0kb downstream 5.0kb downstream 17458 true Chr11: 4758004-4775461 Glycine max
Glyma.11G062900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4758004-4763003 Glycine max
Glyma.11G062900 10.0kb upstream 10.0kb upstream 22458 true Chr11: 4763004-4785461 Glycine max
Glyma.11G062900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4775462-4785461 Glycine max
Glyma.11G062900 10.0kb downstream 10.0kb downstream 22458 true Chr11: 4753004-4775461 Glycine max
Glyma.11G062900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4753004-4763003 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
122296343 5265 Fabidae View MSA
124039711 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.724996 0.0 2.30984   Low
cufflinks 3.36063 0.0 9.04862    
cufflinks 0.934343 0.0 2.85465   Low
cufflinks 2.67301 0.0 7.28461    
cufflinks 2.28377 0.0 6.30598    
cufflinks 1.20991 0.0 3.57976    
cufflinks 4.65625 0.0 12.4319   High
cufflinks 1.37021 0.0 3.98759    
cufflinks 2.33243 0.0 6.42054    
cufflinks 1.314        
cufflinks 0.177       Low
cufflinks 1.351        
cufflinks 1.523        
cufflinks 2.12        
cufflinks 0.276       Low
cufflinks 1.667        
cufflinks 0.314       Low
cufflinks 2.485       High
cufflinks 2.648       High
cufflinks 0.998        
cufflinks 0.287       Low
cufflinks 1.224        
cufflinks 1.992        
cufflinks 0.207       Low
cufflinks 1.274        
cufflinks 0.44        

0 Strain