Gene : Glyma.11G063500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED Genomic Order:  635
Name:  ? Glyma.11G063500 Secondary Identifier:  ? PAC:30530100
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G063500 0.5kb upstream 0.5kb upstream 2452 true Chr11: 4800168-4802619 Glycine max
Glyma.11G063500 0.5kb upstream 0.5kb upstream 500 false Chr11: 4802120-4802619 Glycine max
Glyma.11G063500 0.5kb downstream 0.5kb downstream 2452 true Chr11: 4799668-4802119 Glycine max
Glyma.11G063500 0.5kb downstream 0.5kb downstream 500 false Chr11: 4799668-4800167 Glycine max
Glyma.11G063500 1.0kb upstream 1.0kb upstream 2952 true Chr11: 4800168-4803119 Glycine max
Glyma.11G063500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4802120-4803119 Glycine max
Glyma.11G063500 1.0kb downstream 1.0kb downstream 2952 true Chr11: 4799168-4802119 Glycine max
Glyma.11G063500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4799168-4800167 Glycine max
Glyma.11G063500 2.0kb upstream 2.0kb upstream 3952 true Chr11: 4800168-4804119 Glycine max
Glyma.11G063500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4802120-4804119 Glycine max
Glyma.11G063500 2.0kb downstream 2.0kb downstream 3952 true Chr11: 4798168-4802119 Glycine max
Glyma.11G063500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4798168-4800167 Glycine max
Glyma.11G063500 5.0kb upstream 5.0kb upstream 6952 true Chr11: 4800168-4807119 Glycine max
Glyma.11G063500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4802120-4807119 Glycine max
Glyma.11G063500 5.0kb downstream 5.0kb downstream 6952 true Chr11: 4795168-4802119 Glycine max
Glyma.11G063500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4795168-4800167 Glycine max
Glyma.11G063500 10.0kb upstream 10.0kb upstream 11952 true Chr11: 4800168-4812119 Glycine max
Glyma.11G063500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4802120-4812119 Glycine max
Glyma.11G063500 10.0kb downstream 10.0kb downstream 11952 true Chr11: 4790168-4802119 Glycine max
Glyma.11G063500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4790168-4800167 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299484 5265 Fabidae View MSA
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.90774 0.0 17.3084   Low
cufflinks 8.51915 0.0 23.9207    
cufflinks 6.35993 0.0 18.4393   Low
cufflinks 9.50333 0.0 26.3911    
cufflinks 12.0719 0.0 32.8707   High
cufflinks 11.9815 0.0 32.6259   High
cufflinks 11.7285 0.0 31.984    
cufflinks 7.8104 0.0 22.1261    
cufflinks 10.0579 0.0 27.761    
cufflinks 7.377        
cufflinks 10.748     High High
cufflinks 5.691       Low
cufflinks 6.912        
cufflinks 6.589       Low
cufflinks 8.423     High  
cufflinks 7.714     High  
cufflinks 9.269     High High
cufflinks 6.859        
cufflinks 7.343        
cufflinks 7.316     High  
cufflinks 9.36     High High
cufflinks 7.491     High  
cufflinks 8.329     High  
cufflinks 7.641     High  
cufflinks 7.791     High  
cufflinks 10.257     High High

0 Strain