Gene : Glyma.11G066900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11618//PTHR11618:SF26 - TRANSCRIPTION INITIATION FACTOR IIB-RELATED Genomic Order:  669
Name:  ? Glyma.11G066900 Secondary Identifier:  ? PAC:30530273
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G066900 0.5kb upstream 0.5kb upstream 3047 true Chr11: 5016036-5019082 Glycine max
Glyma.11G066900 0.5kb upstream 0.5kb upstream 500 false Chr11: 5016036-5016535 Glycine max
Glyma.11G066900 0.5kb downstream 0.5kb downstream 3047 true Chr11: 5016536-5019582 Glycine max
Glyma.11G066900 0.5kb downstream 0.5kb downstream 500 false Chr11: 5019083-5019582 Glycine max
Glyma.11G066900 1.0kb upstream 1.0kb upstream 3547 true Chr11: 5015536-5019082 Glycine max
Glyma.11G066900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5015536-5016535 Glycine max
Glyma.11G066900 1.0kb downstream 1.0kb downstream 3547 true Chr11: 5016536-5020082 Glycine max
Glyma.11G066900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5019083-5020082 Glycine max
Glyma.11G066900 2.0kb upstream 2.0kb upstream 4547 true Chr11: 5014536-5019082 Glycine max
Glyma.11G066900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5014536-5016535 Glycine max
Glyma.11G066900 2.0kb downstream 2.0kb downstream 4547 true Chr11: 5016536-5021082 Glycine max
Glyma.11G066900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5019083-5021082 Glycine max
Glyma.11G066900 5.0kb upstream 5.0kb upstream 7547 true Chr11: 5011536-5019082 Glycine max
Glyma.11G066900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5011536-5016535 Glycine max
Glyma.11G066900 5.0kb downstream 5.0kb downstream 7547 true Chr11: 5016536-5024082 Glycine max
Glyma.11G066900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5019083-5024082 Glycine max
Glyma.11G066900 10.0kb upstream 10.0kb upstream 12547 true Chr11: 5006536-5019082 Glycine max
Glyma.11G066900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5006536-5016535 Glycine max
Glyma.11G066900 10.0kb downstream 10.0kb downstream 12547 true Chr11: 5016536-5029082 Glycine max
Glyma.11G066900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5019083-5029082 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313147 5265 Fabidae View MSA
124063096 5270 Rosid View MSA
123741004 5271 Pentapetalae View MSA
122785820 5272 Eudicot View MSA
122046591 5273 Angiosperm View MSA
121310628 5274 Embryophyte View MSA
123348063 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.79832 0.0 11.4076   Low
cufflinks 6.60507 0.0 18.5516    
cufflinks 4.4646 0.0 13.1361    
cufflinks 5.88094 0.0 16.7126    
cufflinks 5.85887 0.0 16.6059    
cufflinks 5.66771 0.0 16.1376    
cufflinks 10.5378 0.0 28.5121   High
cufflinks 3.78115 0.0 11.3743   Low
cufflinks 5.56931 0.0 15.9108    
cufflinks 2.147       Low
cufflinks 2.296        
cufflinks 3.474        
cufflinks 2.819        
cufflinks 2.135       Low
cufflinks 3.438        
cufflinks 4.425       High
cufflinks 2.277        
cufflinks 3.697        
cufflinks 5.329       High
cufflinks 3.938        
cufflinks 2.388        
cufflinks 3.635        
cufflinks 3.644        
cufflinks 2.461        
cufflinks 4.037        
cufflinks 2.055       Low

0 Strain