Gene : Glyma.11G067800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11632//PTHR11632:SF54 - SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT Genomic Order:  678
Name:  ? Glyma.11G067800 Secondary Identifier:  ? PAC:30529335
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G067800 0.5kb upstream 0.5kb upstream 7556 true Chr11: 5093382-5100937 Glycine max
Glyma.11G067800 0.5kb upstream 0.5kb upstream 500 false Chr11: 5093382-5093881 Glycine max
Glyma.11G067800 0.5kb downstream 0.5kb downstream 7556 true Chr11: 5093882-5101437 Glycine max
Glyma.11G067800 0.5kb downstream 0.5kb downstream 500 false Chr11: 5100938-5101437 Glycine max
Glyma.11G067800 1.0kb upstream 1.0kb upstream 8056 true Chr11: 5092882-5100937 Glycine max
Glyma.11G067800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5092882-5093881 Glycine max
Glyma.11G067800 1.0kb downstream 1.0kb downstream 8056 true Chr11: 5093882-5101937 Glycine max
Glyma.11G067800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5100938-5101937 Glycine max
Glyma.11G067800 2.0kb upstream 2.0kb upstream 9056 true Chr11: 5091882-5100937 Glycine max
Glyma.11G067800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5091882-5093881 Glycine max
Glyma.11G067800 2.0kb downstream 2.0kb downstream 9056 true Chr11: 5093882-5102937 Glycine max
Glyma.11G067800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5100938-5102937 Glycine max
Glyma.11G067800 5.0kb upstream 5.0kb upstream 12056 true Chr11: 5088882-5100937 Glycine max
Glyma.11G067800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5088882-5093881 Glycine max
Glyma.11G067800 5.0kb downstream 5.0kb downstream 12056 true Chr11: 5093882-5105937 Glycine max
Glyma.11G067800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5100938-5105937 Glycine max
Glyma.11G067800 10.0kb upstream 10.0kb upstream 17056 true Chr11: 5083882-5100937 Glycine max
Glyma.11G067800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5083882-5093881 Glycine max
Glyma.11G067800 10.0kb downstream 10.0kb downstream 17056 true Chr11: 5093882-5110937 Glycine max
Glyma.11G067800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5100938-5110937 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310620 5265 Fabidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 50.6082 0.0 195.024 High  
cufflinks 34.7245 0.0 138.492 High Low
cufflinks 35.2564 0.0 142.008 High Low
cufflinks 50.3675 0.0 226.725 High  
cufflinks 70.2844 0.0 305.806 High High
cufflinks 54.2118 0.0 213.409 High  
cufflinks 56.0318 0.0 222.906 High  
cufflinks 44.1668 0.0 191.128 High  
cufflinks 55.6719 0.0 220.658 High  
cufflinks 11.317     High High
cufflinks 3.476       Low
cufflinks 8.249     High  
cufflinks 15.163     High High
cufflinks 16.096     High High
cufflinks 5.156        
cufflinks 5.214        
cufflinks 6.776     High  
cufflinks 9.911     High  
cufflinks 7.964     High  
cufflinks 4.145       Low
cufflinks 5.071        
cufflinks 5.07        
cufflinks 6.035        
cufflinks 4.63        
cufflinks 4.753        
cufflinks 6.338     High  

0 Strain