Gene : Glyma.11G069000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23075:SF3 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  690
Name:  ? Glyma.11G069000 Secondary Identifier:  ? PAC:30529978
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G069000 0.5kb upstream 0.5kb upstream 6673 true Chr11: 5182663-5189335 Glycine max
Glyma.11G069000 0.5kb upstream 0.5kb upstream 500 false Chr11: 5188836-5189335 Glycine max
Glyma.11G069000 0.5kb downstream 0.5kb downstream 6673 true Chr11: 5182163-5188835 Glycine max
Glyma.11G069000 0.5kb downstream 0.5kb downstream 500 false Chr11: 5182163-5182662 Glycine max
Glyma.11G069000 1.0kb upstream 1.0kb upstream 7173 true Chr11: 5182663-5189835 Glycine max
Glyma.11G069000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5188836-5189835 Glycine max
Glyma.11G069000 1.0kb downstream 1.0kb downstream 7173 true Chr11: 5181663-5188835 Glycine max
Glyma.11G069000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5181663-5182662 Glycine max
Glyma.11G069000 2.0kb upstream 2.0kb upstream 8173 true Chr11: 5182663-5190835 Glycine max
Glyma.11G069000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5188836-5190835 Glycine max
Glyma.11G069000 2.0kb downstream 2.0kb downstream 8173 true Chr11: 5180663-5188835 Glycine max
Glyma.11G069000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5180663-5182662 Glycine max
Glyma.11G069000 5.0kb upstream 5.0kb upstream 11173 true Chr11: 5182663-5193835 Glycine max
Glyma.11G069000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5188836-5193835 Glycine max
Glyma.11G069000 5.0kb downstream 5.0kb downstream 11173 true Chr11: 5177663-5188835 Glycine max
Glyma.11G069000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5177663-5182662 Glycine max
Glyma.11G069000 10.0kb upstream 10.0kb upstream 16173 true Chr11: 5182663-5198835 Glycine max
Glyma.11G069000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5188836-5198835 Glycine max
Glyma.11G069000 10.0kb downstream 10.0kb downstream 16173 true Chr11: 5172663-5188835 Glycine max
Glyma.11G069000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5172663-5182662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308293 5265 Fabidae View MSA
124067712 5270 Rosid View MSA
123739044 5271 Pentapetalae View MSA
122789244 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.40764 0.0 20.0027    
cufflinks 4.14073 0.0 11.716    
cufflinks 1.18063 0.0 3.94346   Low
cufflinks 3.46538 0.0 9.98904    
cufflinks 8.06575 0.0 21.6813   High
cufflinks 3.69734 0.0 10.5692    
cufflinks 5.33706 0.0 14.7254    
cufflinks 4.33181 0.0 12.183    
cufflinks 5.12214 0.0 14.1737    
cufflinks 1.182        
cufflinks 0.889        
cufflinks 1.334        
cufflinks 3.921       High
cufflinks 5.697       High
cufflinks 0.662        
cufflinks 0.902        
cufflinks 1.178        
cufflinks 1.283        
cufflinks 2.199        
cufflinks 0.6       Low
cufflinks 0.596       Low
cufflinks 0.748        
cufflinks 1.648        
cufflinks 0.616       Low
cufflinks 0.846        
cufflinks 1.15        

0 Strain