Gene : Glyma.11G069400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED Genomic Order:  694
Name:  ? Glyma.11G069400 Secondary Identifier:  ? PAC:30528842
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G069400 0.5kb upstream 0.5kb upstream 3606 true Chr11: 5217819-5221424 Glycine max
Glyma.11G069400 0.5kb upstream 0.5kb upstream 500 false Chr11: 5220925-5221424 Glycine max
Glyma.11G069400 0.5kb downstream 0.5kb downstream 3606 true Chr11: 5217319-5220924 Glycine max
Glyma.11G069400 0.5kb downstream 0.5kb downstream 500 false Chr11: 5217319-5217818 Glycine max
Glyma.11G069400 1.0kb upstream 1.0kb upstream 4106 true Chr11: 5217819-5221924 Glycine max
Glyma.11G069400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5220925-5221924 Glycine max
Glyma.11G069400 1.0kb downstream 1.0kb downstream 4106 true Chr11: 5216819-5220924 Glycine max
Glyma.11G069400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5216819-5217818 Glycine max
Glyma.11G069400 2.0kb upstream 2.0kb upstream 5106 true Chr11: 5217819-5222924 Glycine max
Glyma.11G069400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5220925-5222924 Glycine max
Glyma.11G069400 2.0kb downstream 2.0kb downstream 5106 true Chr11: 5215819-5220924 Glycine max
Glyma.11G069400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5215819-5217818 Glycine max
Glyma.11G069400 5.0kb upstream 5.0kb upstream 8106 true Chr11: 5217819-5225924 Glycine max
Glyma.11G069400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5220925-5225924 Glycine max
Glyma.11G069400 5.0kb downstream 5.0kb downstream 8106 true Chr11: 5212819-5220924 Glycine max
Glyma.11G069400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5212819-5217818 Glycine max
Glyma.11G069400 10.0kb upstream 10.0kb upstream 13106 true Chr11: 5217819-5230924 Glycine max
Glyma.11G069400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5220925-5230924 Glycine max
Glyma.11G069400 10.0kb downstream 10.0kb downstream 13106 true Chr11: 5207819-5220924 Glycine max
Glyma.11G069400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5207819-5217818 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311486 5265 Fabidae View MSA
124064248 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.07974 0.0 30.5894   Low
cufflinks 17.8141 0.0 56.0113    
cufflinks 9.99005 0.0 31.3588   Low
cufflinks 17.1255 0.0 59.6806    
cufflinks 15.6655 0.0 49.483    
cufflinks 16.8613 0.0 53.3755    
cufflinks 24.5043 0.0 77.6558 High High
cufflinks 13.4576 0.0 46.6323    
cufflinks 18.6818 0.0 58.1189    
cufflinks 8.325     High High
cufflinks 3.673       Low
cufflinks 5.43        
cufflinks 5.641        
cufflinks 5.425        
cufflinks 5.996     High  
cufflinks 6.278        
cufflinks 4.342       Low
cufflinks 6.424        
cufflinks 8.756     High High
cufflinks 5.642        
cufflinks 4.209       Low
cufflinks 6.221        
cufflinks 7.281       High
cufflinks 4.89        
cufflinks 6.106        
cufflinks 5.537        

0 Strain