Gene : Glyma.11G056200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10015:SF166 - HEAT STRESS TRANSCRIPTION FACTOR B-1 Genomic Order:  562
Name:  ? Glyma.11G056200 Secondary Identifier:  ? PAC:30530773
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G056200 0.5kb upstream 0.5kb upstream 2924 true Chr11: 4254459-4257382 Glycine max
Glyma.11G056200 0.5kb upstream 0.5kb upstream 500 false Chr11: 4254459-4254958 Glycine max
Glyma.11G056200 0.5kb downstream 0.5kb downstream 2924 true Chr11: 4254959-4257882 Glycine max
Glyma.11G056200 0.5kb downstream 0.5kb downstream 500 false Chr11: 4257383-4257882 Glycine max
Glyma.11G056200 1.0kb upstream 1.0kb upstream 3424 true Chr11: 4253959-4257382 Glycine max
Glyma.11G056200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4253959-4254958 Glycine max
Glyma.11G056200 1.0kb downstream 1.0kb downstream 3424 true Chr11: 4254959-4258382 Glycine max
Glyma.11G056200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4257383-4258382 Glycine max
Glyma.11G056200 2.0kb upstream 2.0kb upstream 4424 true Chr11: 4252959-4257382 Glycine max
Glyma.11G056200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4252959-4254958 Glycine max
Glyma.11G056200 2.0kb downstream 2.0kb downstream 4424 true Chr11: 4254959-4259382 Glycine max
Glyma.11G056200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4257383-4259382 Glycine max
Glyma.11G056200 5.0kb upstream 5.0kb upstream 7424 true Chr11: 4249959-4257382 Glycine max
Glyma.11G056200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4249959-4254958 Glycine max
Glyma.11G056200 5.0kb downstream 5.0kb downstream 7424 true Chr11: 4254959-4262382 Glycine max
Glyma.11G056200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4257383-4262382 Glycine max
Glyma.11G056200 10.0kb upstream 10.0kb upstream 12424 true Chr11: 4244959-4257382 Glycine max
Glyma.11G056200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4244959-4254958 Glycine max
Glyma.11G056200 10.0kb downstream 10.0kb downstream 12424 true Chr11: 4254959-4267382 Glycine max
Glyma.11G056200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4257383-4267382 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309469 5265 Fabidae View MSA
124060729 5270 Rosid View MSA
123741072 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.47344 0.0 8.50027    
cufflinks 0.988252 0.0 4.3482    
cufflinks 2.92421 0.0 9.6884    
cufflinks 0.76414 0.0 3.47081    
cufflinks 2.76703 0.0 9.20174    
cufflinks 21.5127 0.0 64.6442   High
cufflinks 0.220808 0.0 1.1153   Low
cufflinks 2.99649 0.0 9.75245    
cufflinks 2.97432 0.0 9.76808    
cufflinks 6.269        
cufflinks 23.725     High High
cufflinks 3.439        
cufflinks 2.765        
cufflinks 1.065        
cufflinks 3.439        
cufflinks 0.371       Low
cufflinks 16.293     High High
cufflinks 2.225        
cufflinks 0.993        
cufflinks 0.334       Low
cufflinks 14.194     High High
cufflinks 0.435       Low
cufflinks 0.785        
cufflinks 27.722     High High
cufflinks 0.344       Low
cufflinks 23.499     High High

0 Strain