Gene : Glyma.11G056500 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00036//PF13202//PF13499 - EF hand (EF-hand_1) // EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7) Genomic Order:  565
Name:  ? Glyma.11G056500 Secondary Identifier:  ? PAC:30530283
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G056500 0.5kb upstream 0.5kb upstream 1980 true Chr11: 4264579-4266558 Glycine max
Glyma.11G056500 0.5kb upstream 0.5kb upstream 500 false Chr11: 4264579-4265078 Glycine max
Glyma.11G056500 0.5kb downstream 0.5kb downstream 1980 true Chr11: 4265079-4267058 Glycine max
Glyma.11G056500 0.5kb downstream 0.5kb downstream 500 false Chr11: 4266559-4267058 Glycine max
Glyma.11G056500 1.0kb upstream 1.0kb upstream 2480 true Chr11: 4264079-4266558 Glycine max
Glyma.11G056500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4264079-4265078 Glycine max
Glyma.11G056500 1.0kb downstream 1.0kb downstream 2480 true Chr11: 4265079-4267558 Glycine max
Glyma.11G056500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4266559-4267558 Glycine max
Glyma.11G056500 2.0kb upstream 2.0kb upstream 3480 true Chr11: 4263079-4266558 Glycine max
Glyma.11G056500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4263079-4265078 Glycine max
Glyma.11G056500 2.0kb downstream 2.0kb downstream 3480 true Chr11: 4265079-4268558 Glycine max
Glyma.11G056500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4266559-4268558 Glycine max
Glyma.11G056500 5.0kb upstream 5.0kb upstream 6480 true Chr11: 4260079-4266558 Glycine max
Glyma.11G056500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4260079-4265078 Glycine max
Glyma.11G056500 5.0kb downstream 5.0kb downstream 6480 true Chr11: 4265079-4271558 Glycine max
Glyma.11G056500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4266559-4271558 Glycine max
Glyma.11G056500 10.0kb upstream 10.0kb upstream 11480 true Chr11: 4255079-4266558 Glycine max
Glyma.11G056500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4255079-4265078 Glycine max
Glyma.11G056500 10.0kb downstream 10.0kb downstream 11480 true Chr11: 4265079-4276558 Glycine max
Glyma.11G056500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4266559-4276558 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307758 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.29473 0.0 4.58458    
cufflinks 0.274507 0.0 1.05451    
cufflinks 11.9546 0.0 32.4847   High
cufflinks 1.21916 0.0 4.32386    
cufflinks 0.322555 0.0 1.23296    
cufflinks 0.239877 0.0 0.928062 Low  
cufflinks 0.622104 0.0 2.30822    
cufflinks 0.373355 0.0 1.415    
cufflinks 0.936284 0.0 3.38723    
cufflinks 0.92        
cufflinks 22.198     High High
cufflinks 8.634     High  
cufflinks 0.572        
cufflinks 0.111       Low
cufflinks 1.982        
cufflinks 0.364        
cufflinks 6.035        
cufflinks 2.093        
cufflinks 0.154       Low
cufflinks 0.156       Low
cufflinks 17.827     High High
cufflinks 0.379        
cufflinks 0.269        
cufflinks 16.732     High High
cufflinks 0.26        
cufflinks 13.703     High High

0 Strain