Gene : Glyma.11G058500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13391 - TUBULIN-RELATED PROTEIN Genomic Order:  585
Name:  ? Glyma.11G058500 Secondary Identifier:  ? PAC:30529824
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G058500 0.5kb upstream 0.5kb upstream 7263 true Chr11: 4417029-4424291 Glycine max
Glyma.11G058500 0.5kb upstream 0.5kb upstream 500 false Chr11: 4423792-4424291 Glycine max
Glyma.11G058500 0.5kb downstream 0.5kb downstream 7263 true Chr11: 4416529-4423791 Glycine max
Glyma.11G058500 0.5kb downstream 0.5kb downstream 500 false Chr11: 4416529-4417028 Glycine max
Glyma.11G058500 1.0kb upstream 1.0kb upstream 7763 true Chr11: 4417029-4424791 Glycine max
Glyma.11G058500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4423792-4424791 Glycine max
Glyma.11G058500 1.0kb downstream 1.0kb downstream 7763 true Chr11: 4416029-4423791 Glycine max
Glyma.11G058500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4416029-4417028 Glycine max
Glyma.11G058500 2.0kb upstream 2.0kb upstream 8763 true Chr11: 4417029-4425791 Glycine max
Glyma.11G058500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4423792-4425791 Glycine max
Glyma.11G058500 2.0kb downstream 2.0kb downstream 8763 true Chr11: 4415029-4423791 Glycine max
Glyma.11G058500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4415029-4417028 Glycine max
Glyma.11G058500 5.0kb upstream 5.0kb upstream 11763 true Chr11: 4417029-4428791 Glycine max
Glyma.11G058500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4423792-4428791 Glycine max
Glyma.11G058500 5.0kb downstream 5.0kb downstream 11763 true Chr11: 4412029-4423791 Glycine max
Glyma.11G058500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4412029-4417028 Glycine max
Glyma.11G058500 10.0kb upstream 10.0kb upstream 16763 true Chr11: 4417029-4433791 Glycine max
Glyma.11G058500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4423792-4433791 Glycine max
Glyma.11G058500 10.0kb downstream 10.0kb downstream 16763 true Chr11: 4407029-4423791 Glycine max
Glyma.11G058500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4407029-4417028 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306217 5265 Fabidae View MSA
124066645 5270 Rosid View MSA
123741201 5271 Pentapetalae View MSA
122788298 5272 Eudicot View MSA
122047686 5273 Angiosperm View MSA
121346251 5274 Embryophyte View MSA
123424627 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.54665 0.0 10.6319    
cufflinks 3.14497 0.0 14.1776    
cufflinks 1.75936 0.0 9.52446   Low
cufflinks 2.8598 0.0 13.3517    
cufflinks 3.13445 0.0 14.1202    
cufflinks 1.60034 0.0 5.73375   Low
cufflinks 4.19775 0.0 17.4849   High
cufflinks 2.48299 0.0 7.80297    
cufflinks 2.64799 0.0 10.6559    
cufflinks 0.191        
cufflinks 0.085       Low
cufflinks 0.276        
cufflinks 0.32       High
cufflinks 0.379       High
cufflinks 0.16        
cufflinks 0.166        
cufflinks 0.123        
cufflinks 0.316       High
cufflinks 0.312       High
cufflinks 0.168        
cufflinks 0.108       Low
cufflinks 0.192        
cufflinks 0.216        
cufflinks 0.067       Low
cufflinks 0.195        
cufflinks 0.152        

0 Strain