Gene : Glyma.11G058600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31003//PTHR31003:SF2 - MYB FAMILY TRANSCRIPTION FACTOR Genomic Order:  586
Name:  ? Glyma.11G058600 Secondary Identifier:  ? PAC:30530426
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G058600 0.5kb upstream 0.5kb upstream 2820 true Chr11: 4425323-4428142 Glycine max
Glyma.11G058600 0.5kb upstream 0.5kb upstream 500 false Chr11: 4427643-4428142 Glycine max
Glyma.11G058600 0.5kb downstream 0.5kb downstream 2820 true Chr11: 4424823-4427642 Glycine max
Glyma.11G058600 0.5kb downstream 0.5kb downstream 500 false Chr11: 4424823-4425322 Glycine max
Glyma.11G058600 1.0kb upstream 1.0kb upstream 3320 true Chr11: 4425323-4428642 Glycine max
Glyma.11G058600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4427643-4428642 Glycine max
Glyma.11G058600 1.0kb downstream 1.0kb downstream 3320 true Chr11: 4424323-4427642 Glycine max
Glyma.11G058600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4424323-4425322 Glycine max
Glyma.11G058600 2.0kb upstream 2.0kb upstream 4320 true Chr11: 4425323-4429642 Glycine max
Glyma.11G058600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4427643-4429642 Glycine max
Glyma.11G058600 2.0kb downstream 2.0kb downstream 4320 true Chr11: 4423323-4427642 Glycine max
Glyma.11G058600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4423323-4425322 Glycine max
Glyma.11G058600 5.0kb upstream 5.0kb upstream 7320 true Chr11: 4425323-4432642 Glycine max
Glyma.11G058600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4427643-4432642 Glycine max
Glyma.11G058600 5.0kb downstream 5.0kb downstream 7320 true Chr11: 4420323-4427642 Glycine max
Glyma.11G058600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4420323-4425322 Glycine max
Glyma.11G058600 10.0kb upstream 10.0kb upstream 12320 true Chr11: 4425323-4437642 Glycine max
Glyma.11G058600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4427643-4437642 Glycine max
Glyma.11G058600 10.0kb downstream 10.0kb downstream 12320 true Chr11: 4415323-4427642 Glycine max
Glyma.11G058600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4415323-4425322 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312255 5265 Fabidae View MSA
124066907 5270 Rosid View MSA
123742212 5271 Pentapetalae View MSA
122792121 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.046392 0.0 0.188992 Low Low
cufflinks 0.0341419 0.0 0.14158 Low Low
cufflinks 1.38085 0.0 4.7147    
cufflinks 2.51247 0.0 7.93402   High
cufflinks 0.835533 0.0 2.98166    
cufflinks 0.765583 0.0 2.75138    
cufflinks 2.20441 0.0 7.09697   High
cufflinks 0.0910763 0.0 0.360896 Low  
cufflinks 0.33608 0.0 1.26263    
cufflinks 0.767        
cufflinks 0.844        
cufflinks 3.388       High
cufflinks 1.259        
cufflinks 1.192        
cufflinks 1.432        
cufflinks 0.521        
cufflinks 0.193       Low
cufflinks 3.418       High
cufflinks 0.229       Low
cufflinks 0.453        
cufflinks 0.451        
cufflinks 0.218       Low
cufflinks 0.137       Low
cufflinks 0.92        
cufflinks 0.702        
cufflinks 0.306        

0 Strain