Gene : Glyma.11G059700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13437 - NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 Genomic Order:  597
Name:  ? Glyma.11G059700 Secondary Identifier:  ? PAC:30530965
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G059700 0.5kb upstream 0.5kb upstream 5739 true Chr11: 4515386-4521124 Glycine max
Glyma.11G059700 0.5kb upstream 0.5kb upstream 500 false Chr11: 4520625-4521124 Glycine max
Glyma.11G059700 0.5kb downstream 0.5kb downstream 5739 true Chr11: 4514886-4520624 Glycine max
Glyma.11G059700 0.5kb downstream 0.5kb downstream 500 false Chr11: 4514886-4515385 Glycine max
Glyma.11G059700 1.0kb upstream 1.0kb upstream 6239 true Chr11: 4515386-4521624 Glycine max
Glyma.11G059700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4520625-4521624 Glycine max
Glyma.11G059700 1.0kb downstream 1.0kb downstream 6239 true Chr11: 4514386-4520624 Glycine max
Glyma.11G059700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4514386-4515385 Glycine max
Glyma.11G059700 2.0kb upstream 2.0kb upstream 7239 true Chr11: 4515386-4522624 Glycine max
Glyma.11G059700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4520625-4522624 Glycine max
Glyma.11G059700 2.0kb downstream 2.0kb downstream 7239 true Chr11: 4513386-4520624 Glycine max
Glyma.11G059700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4513386-4515385 Glycine max
Glyma.11G059700 5.0kb upstream 5.0kb upstream 10239 true Chr11: 4515386-4525624 Glycine max
Glyma.11G059700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4520625-4525624 Glycine max
Glyma.11G059700 5.0kb downstream 5.0kb downstream 10239 true Chr11: 4510386-4520624 Glycine max
Glyma.11G059700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4510386-4515385 Glycine max
Glyma.11G059700 10.0kb upstream 10.0kb upstream 15239 true Chr11: 4515386-4530624 Glycine max
Glyma.11G059700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4520625-4530624 Glycine max
Glyma.11G059700 10.0kb downstream 10.0kb downstream 15239 true Chr11: 4505386-4520624 Glycine max
Glyma.11G059700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4505386-4515385 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301960 5265 Fabidae View MSA
124074755 5270 Rosid View MSA
123740540 5271 Pentapetalae View MSA
122789267 5272 Eudicot View MSA
122043040 5273 Angiosperm View MSA
121344391 5274 Embryophyte View MSA
123428093 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.31277 0.0 29.6104    
cufflinks 12.3273 0.0 42.5325   High
cufflinks 5.32717 0.0 20.8014   Low
cufflinks 7.63857 0.0 27.9878    
cufflinks 8.93846 0.0 31.544    
cufflinks 4.88365 0.0 19.4756   Low
cufflinks 14.0466 0.0 48.0925   High
cufflinks 6.84626 0.0 25.1197    
cufflinks 8.64897 0.0 30.9378    
cufflinks 1.093        
cufflinks 0.238       Low
cufflinks 1.505        
cufflinks 1.899       High
cufflinks 2.451       High
cufflinks 0.4       Low
cufflinks 0.973        
cufflinks 0.559        
cufflinks 1.669        
cufflinks 2.389       High
cufflinks 1.013        
cufflinks 0.34       Low
cufflinks 1.028        
cufflinks 1.616        
cufflinks 0.397       Low
cufflinks 0.931        
cufflinks 0.343       Low

0 Strain