Gene : Glyma.11G061300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR34058:SF1 - OXYGEN-EVOLVING ENHANCER PROTEIN 1-1, CHLOROPLASTIC-RELATED Genomic Order:  613
Name:  ? Glyma.11G061300 Secondary Identifier:  ? PAC:30528365
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G061300 0.5kb upstream 0.5kb upstream 2556 true Chr11: 4590702-4593257 Glycine max
Glyma.11G061300 0.5kb upstream 0.5kb upstream 500 false Chr11: 4590702-4591201 Glycine max
Glyma.11G061300 0.5kb downstream 0.5kb downstream 2556 true Chr11: 4591202-4593757 Glycine max
Glyma.11G061300 0.5kb downstream 0.5kb downstream 500 false Chr11: 4593258-4593757 Glycine max
Glyma.11G061300 1.0kb upstream 1.0kb upstream 3056 true Chr11: 4590202-4593257 Glycine max
Glyma.11G061300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4590202-4591201 Glycine max
Glyma.11G061300 1.0kb downstream 1.0kb downstream 3056 true Chr11: 4591202-4594257 Glycine max
Glyma.11G061300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4593258-4594257 Glycine max
Glyma.11G061300 2.0kb upstream 2.0kb upstream 4056 true Chr11: 4589202-4593257 Glycine max
Glyma.11G061300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4589202-4591201 Glycine max
Glyma.11G061300 2.0kb downstream 2.0kb downstream 4056 true Chr11: 4591202-4595257 Glycine max
Glyma.11G061300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4593258-4595257 Glycine max
Glyma.11G061300 5.0kb upstream 5.0kb upstream 7056 true Chr11: 4586202-4593257 Glycine max
Glyma.11G061300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4586202-4591201 Glycine max
Glyma.11G061300 5.0kb downstream 5.0kb downstream 7056 true Chr11: 4591202-4598257 Glycine max
Glyma.11G061300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4593258-4598257 Glycine max
Glyma.11G061300 10.0kb upstream 10.0kb upstream 12056 true Chr11: 4581202-4593257 Glycine max
Glyma.11G061300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4581202-4591201 Glycine max
Glyma.11G061300 10.0kb downstream 10.0kb downstream 12056 true Chr11: 4591202-4603257 Glycine max
Glyma.11G061300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4593258-4603257 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310095 5265 Fabidae View MSA
124063467 5270 Rosid View MSA
123739417 5271 Pentapetalae View MSA
122788254 5272 Eudicot View MSA
122047967 5273 Angiosperm View MSA
121344212 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 278.212 0.0 1112.06 High High
cufflinks 171.209 0.0 595.101 High  
cufflinks 51.6391 0.0 145.81 High  
cufflinks 97.1355 0.0 301.097 High  
cufflinks 12.8338 0.0 34.4356   Low
cufflinks 17.7702 0.0 47.4098    
cufflinks 148.839 0.0 504.744 High  
cufflinks 58.4598 0.0 168.365 High  
cufflinks 7.09787 0.0 19.7911   Low
cufflinks 94.267     High  
cufflinks 2.232        
cufflinks 55.686     High  
cufflinks 4.045        
cufflinks 3.365        
cufflinks 1.828       Low
cufflinks 425.229     High High
cufflinks 0.529       Low
cufflinks 70.644     High  
cufflinks 139.379     High  
cufflinks 518.918     High High
cufflinks 3.232        
cufflinks 492.02     High High
cufflinks 342.989     High High
cufflinks 2.355        
cufflinks 528.052     High High
cufflinks 2.861        

0 Strain