Gene : Glyma.11G062300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11850//PTHR11850:SF103 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  623
Name:  ? Glyma.11G062300 Secondary Identifier:  ? PAC:30531397
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G062300 0.5kb upstream 0.5kb upstream 8703 true Chr11: 4694478-4703180 Glycine max
Glyma.11G062300 0.5kb upstream 0.5kb upstream 500 false Chr11: 4702681-4703180 Glycine max
Glyma.11G062300 0.5kb downstream 0.5kb downstream 8703 true Chr11: 4693978-4702680 Glycine max
Glyma.11G062300 0.5kb downstream 0.5kb downstream 500 false Chr11: 4693978-4694477 Glycine max
Glyma.11G062300 1.0kb upstream 1.0kb upstream 9203 true Chr11: 4694478-4703680 Glycine max
Glyma.11G062300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4702681-4703680 Glycine max
Glyma.11G062300 1.0kb downstream 1.0kb downstream 9203 true Chr11: 4693478-4702680 Glycine max
Glyma.11G062300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4693478-4694477 Glycine max
Glyma.11G062300 2.0kb upstream 2.0kb upstream 10203 true Chr11: 4694478-4704680 Glycine max
Glyma.11G062300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4702681-4704680 Glycine max
Glyma.11G062300 2.0kb downstream 2.0kb downstream 10203 true Chr11: 4692478-4702680 Glycine max
Glyma.11G062300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4692478-4694477 Glycine max
Glyma.11G062300 5.0kb upstream 5.0kb upstream 13203 true Chr11: 4694478-4707680 Glycine max
Glyma.11G062300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4702681-4707680 Glycine max
Glyma.11G062300 5.0kb downstream 5.0kb downstream 13203 true Chr11: 4689478-4702680 Glycine max
Glyma.11G062300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4689478-4694477 Glycine max
Glyma.11G062300 10.0kb upstream 10.0kb upstream 18203 true Chr11: 4694478-4712680 Glycine max
Glyma.11G062300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4702681-4712680 Glycine max
Glyma.11G062300 10.0kb downstream 10.0kb downstream 18203 true Chr11: 4684478-4702680 Glycine max
Glyma.11G062300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4684478-4694477 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255249 5265 Fabidae View MSA
124067451 5270 Rosid View MSA
123743533 5271 Pentapetalae View MSA
122796182 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.5672 0.0 95.577 High High
cufflinks 5.85332 0.0 15.7576    
cufflinks 3.16896 0.0 8.91333   Low
cufflinks 3.37938 0.0 9.43509   Low
cufflinks 13.3573 0.0 35.9996    
cufflinks 13.1144 0.0 35.2861    
cufflinks 27.167 0.0 77.8606 High High
cufflinks 4.75606 0.0 12.9239    
cufflinks 30.4498 0.0 88.4726 High High
cufflinks 0.841        
cufflinks 0.697        
cufflinks 2.945        
cufflinks 0.433       Low
cufflinks 0.042     Low Low
cufflinks 12.82     High High
cufflinks 8.162     High  
cufflinks 2.125        
cufflinks 6.016        
cufflinks 5.213        
cufflinks 10.261     High High
cufflinks 0.414       Low
cufflinks 10.192     High  
cufflinks 6.172        
cufflinks 0.642        
cufflinks 8.117     High  
cufflinks 1.258        

0 Strain