Gene : Glyma.11G103300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10774//PTHR10774:SF82 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  1033
Name:  ? Glyma.11G103300 Secondary Identifier:  ? PAC:30530931
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G103300 0.5kb upstream 0.5kb upstream 8967 true Chr11: 7847747-7856713 Glycine max
Glyma.11G103300 0.5kb upstream 0.5kb upstream 500 false Chr11: 7856214-7856713 Glycine max
Glyma.11G103300 0.5kb downstream 0.5kb downstream 8967 true Chr11: 7847247-7856213 Glycine max
Glyma.11G103300 0.5kb downstream 0.5kb downstream 500 false Chr11: 7847247-7847746 Glycine max
Glyma.11G103300 1.0kb upstream 1.0kb upstream 9467 true Chr11: 7847747-7857213 Glycine max
Glyma.11G103300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7856214-7857213 Glycine max
Glyma.11G103300 1.0kb downstream 1.0kb downstream 9467 true Chr11: 7846747-7856213 Glycine max
Glyma.11G103300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7846747-7847746 Glycine max
Glyma.11G103300 2.0kb upstream 2.0kb upstream 10467 true Chr11: 7847747-7858213 Glycine max
Glyma.11G103300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7856214-7858213 Glycine max
Glyma.11G103300 2.0kb downstream 2.0kb downstream 10467 true Chr11: 7845747-7856213 Glycine max
Glyma.11G103300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7845747-7847746 Glycine max
Glyma.11G103300 5.0kb upstream 5.0kb upstream 13467 true Chr11: 7847747-7861213 Glycine max
Glyma.11G103300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7856214-7861213 Glycine max
Glyma.11G103300 5.0kb downstream 5.0kb downstream 13467 true Chr11: 7842747-7856213 Glycine max
Glyma.11G103300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7842747-7847746 Glycine max
Glyma.11G103300 10.0kb upstream 10.0kb upstream 18467 true Chr11: 7847747-7866213 Glycine max
Glyma.11G103300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7856214-7866213 Glycine max
Glyma.11G103300 10.0kb downstream 10.0kb downstream 18467 true Chr11: 7837747-7856213 Glycine max
Glyma.11G103300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7837747-7847746 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303586 5265 Fabidae View MSA
124061205 5270 Rosid View MSA
123738093 5271 Pentapetalae View MSA
122787602 5272 Eudicot View MSA
122047989 5273 Angiosperm View MSA
121348043 5274 Embryophyte View MSA
123426987 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.252 0.0 30.0265   High
cufflinks 4.16256 0.0 11.7642    
cufflinks 4.41 0.0 12.3829    
cufflinks 7.64163 0.0 20.6032   High
cufflinks 3.88637 0.0 11.0543    
cufflinks 5.31711 0.0 14.6669    
cufflinks 5.38442 0.0 14.846    
cufflinks 4.55976 0.0 12.7734    
cufflinks 3.84176 0.0 10.9519    
cufflinks 1.559        
cufflinks 0.537       Low
cufflinks 1.773        
cufflinks 1.333        
cufflinks 0.978        
cufflinks 0.56       Low
cufflinks 1.994        
cufflinks 2.214        
cufflinks 2.039        
cufflinks 1.806        
cufflinks 2.02        
cufflinks 0.849       Low
cufflinks 2.478       High
cufflinks 2.712       High
cufflinks 1.236        
cufflinks 1.944        
cufflinks 1.31        

0 Strain