Gene : Glyma.11G103200 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1032
Name:  ? Glyma.11G103200 Secondary Identifier:  ? PAC:30529631
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G103200 0.5kb upstream 0.5kb upstream 5565 true Chr11: 7841715-7847279 Glycine max
Glyma.11G103200 0.5kb upstream 0.5kb upstream 500 false Chr11: 7841715-7842214 Glycine max
Glyma.11G103200 0.5kb downstream 0.5kb downstream 5565 true Chr11: 7842215-7847779 Glycine max
Glyma.11G103200 0.5kb downstream 0.5kb downstream 500 false Chr11: 7847280-7847779 Glycine max
Glyma.11G103200 1.0kb upstream 1.0kb upstream 6065 true Chr11: 7841215-7847279 Glycine max
Glyma.11G103200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7841215-7842214 Glycine max
Glyma.11G103200 1.0kb downstream 1.0kb downstream 6065 true Chr11: 7842215-7848279 Glycine max
Glyma.11G103200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7847280-7848279 Glycine max
Glyma.11G103200 2.0kb upstream 2.0kb upstream 7065 true Chr11: 7840215-7847279 Glycine max
Glyma.11G103200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7840215-7842214 Glycine max
Glyma.11G103200 2.0kb downstream 2.0kb downstream 7065 true Chr11: 7842215-7849279 Glycine max
Glyma.11G103200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7847280-7849279 Glycine max
Glyma.11G103200 5.0kb upstream 5.0kb upstream 10065 true Chr11: 7837215-7847279 Glycine max
Glyma.11G103200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7837215-7842214 Glycine max
Glyma.11G103200 5.0kb downstream 5.0kb downstream 10065 true Chr11: 7842215-7852279 Glycine max
Glyma.11G103200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7847280-7852279 Glycine max
Glyma.11G103200 10.0kb upstream 10.0kb upstream 15065 true Chr11: 7832215-7847279 Glycine max
Glyma.11G103200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7832215-7842214 Glycine max
Glyma.11G103200 10.0kb downstream 10.0kb downstream 15065 true Chr11: 7842215-7857279 Glycine max
Glyma.11G103200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7847280-7857279 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302641 5265 Fabidae View MSA
124067693 5270 Rosid View MSA
123738221 5271 Pentapetalae View MSA
122794420 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.99664 0.0 14.2007    
cufflinks 3.54931 0.0 15.4114    
cufflinks 4.74209 0.0 15.8507   High
cufflinks 3.2266 0.0 12.0544    
cufflinks 2.13472 0.0 7.09357   Low
cufflinks 3.21758 0.0 12.4092    
cufflinks 2.94384 0.0 8.89144    
cufflinks 2.99382 0.0 11.5358    
cufflinks 2.65054 0.0 11.4759    
cufflinks 0.73        
cufflinks 0.74        
cufflinks 1.378        
cufflinks 0.837        
cufflinks 0.881        
cufflinks 0.555       Low
cufflinks 1.252        
cufflinks 0.432       Low
cufflinks 1.666       High
cufflinks 1.112        
cufflinks 1.363        
cufflinks 0.849        
cufflinks 1.411       High
cufflinks 1.256        
cufflinks 0.884        
cufflinks 1.359        
cufflinks 0.741        

0 Strain