Gene : Glyma.11G105400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32091:SF5 - GLYCINE-RICH PROTEIN Genomic Order:  1054
Name:  ? Glyma.11G105400 Secondary Identifier:  ? PAC:30531653
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G105400 0.5kb upstream 0.5kb upstream 2931 true Chr11: 8008495-8011425 Glycine max
Glyma.11G105400 0.5kb upstream 0.5kb upstream 500 false Chr11: 8008495-8008994 Glycine max
Glyma.11G105400 0.5kb downstream 0.5kb downstream 2931 true Chr11: 8008995-8011925 Glycine max
Glyma.11G105400 0.5kb downstream 0.5kb downstream 500 false Chr11: 8011426-8011925 Glycine max
Glyma.11G105400 1.0kb upstream 1.0kb upstream 3431 true Chr11: 8007995-8011425 Glycine max
Glyma.11G105400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8007995-8008994 Glycine max
Glyma.11G105400 1.0kb downstream 1.0kb downstream 3431 true Chr11: 8008995-8012425 Glycine max
Glyma.11G105400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8011426-8012425 Glycine max
Glyma.11G105400 2.0kb upstream 2.0kb upstream 4431 true Chr11: 8006995-8011425 Glycine max
Glyma.11G105400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8006995-8008994 Glycine max
Glyma.11G105400 2.0kb downstream 2.0kb downstream 4431 true Chr11: 8008995-8013425 Glycine max
Glyma.11G105400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8011426-8013425 Glycine max
Glyma.11G105400 5.0kb upstream 5.0kb upstream 7431 true Chr11: 8003995-8011425 Glycine max
Glyma.11G105400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8003995-8008994 Glycine max
Glyma.11G105400 5.0kb downstream 5.0kb downstream 7431 true Chr11: 8008995-8016425 Glycine max
Glyma.11G105400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8011426-8016425 Glycine max
Glyma.11G105400 10.0kb upstream 10.0kb upstream 12431 true Chr11: 7998995-8011425 Glycine max
Glyma.11G105400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7998995-8008994 Glycine max
Glyma.11G105400 10.0kb downstream 10.0kb downstream 12431 true Chr11: 8008995-8021425 Glycine max
Glyma.11G105400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8011426-8021425 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305390 5265 Fabidae View MSA
124068960 5270 Rosid View MSA
123736646 5271 Pentapetalae View MSA
122769870 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7262 0.0 49.9998    
cufflinks 10.9404 0.0 29.5207   Low
cufflinks 10.6776 0.0 28.9005   Low
cufflinks 20.4031 0.0 54.5187 High  
cufflinks 20.2574 0.0 54.2107 High  
cufflinks 12.5479 0.0 33.602    
cufflinks 25.5092 0.0 68.7802 High High
cufflinks 15.0602 0.0 40.2163    
cufflinks 21.6628 0.0 57.9721 High  
cufflinks 16.958     High  
cufflinks 21.246     High  
cufflinks 15.984     High  
cufflinks 15.745     High  
cufflinks 21.947     High  
cufflinks 32.38     High High
cufflinks 10.329     High Low
cufflinks 48.87     High High
cufflinks 15.739     High  
cufflinks 12.102     High  
cufflinks 10.212     High Low
cufflinks 35.884     High High
cufflinks 10.865     High Low
cufflinks 16.235     High  
cufflinks 16.713     High  
cufflinks 9.577     High Low
cufflinks 34.835     High High

0 Strain