Gene : Glyma.11G106900 G. max Wm82.a2.v1
Defline:  (1 of 10) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  1069
Name:  ? Glyma.11G106900 Secondary Identifier:  ? PAC:30529958
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G106900 0.5kb upstream 0.5kb upstream 2506 true Chr11: 8148028-8150533 Glycine max
Glyma.11G106900 0.5kb upstream 0.5kb upstream 500 false Chr11: 8148028-8148527 Glycine max
Glyma.11G106900 0.5kb downstream 0.5kb downstream 2506 true Chr11: 8148528-8151033 Glycine max
Glyma.11G106900 0.5kb downstream 0.5kb downstream 500 false Chr11: 8150534-8151033 Glycine max
Glyma.11G106900 1.0kb upstream 1.0kb upstream 3006 true Chr11: 8147528-8150533 Glycine max
Glyma.11G106900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8147528-8148527 Glycine max
Glyma.11G106900 1.0kb downstream 1.0kb downstream 3006 true Chr11: 8148528-8151533 Glycine max
Glyma.11G106900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8150534-8151533 Glycine max
Glyma.11G106900 2.0kb upstream 2.0kb upstream 4006 true Chr11: 8146528-8150533 Glycine max
Glyma.11G106900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8146528-8148527 Glycine max
Glyma.11G106900 2.0kb downstream 2.0kb downstream 4006 true Chr11: 8148528-8152533 Glycine max
Glyma.11G106900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8150534-8152533 Glycine max
Glyma.11G106900 5.0kb upstream 5.0kb upstream 7006 true Chr11: 8143528-8150533 Glycine max
Glyma.11G106900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8143528-8148527 Glycine max
Glyma.11G106900 5.0kb downstream 5.0kb downstream 7006 true Chr11: 8148528-8155533 Glycine max
Glyma.11G106900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8150534-8155533 Glycine max
Glyma.11G106900 10.0kb upstream 10.0kb upstream 12006 true Chr11: 8138528-8150533 Glycine max
Glyma.11G106900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8138528-8148527 Glycine max
Glyma.11G106900 10.0kb downstream 10.0kb downstream 12006 true Chr11: 8148528-8160533 Glycine max
Glyma.11G106900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8150534-8160533 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314180 5265 Fabidae View MSA
124072707 5270 Rosid View MSA
123750901 5271 Pentapetalae View MSA
122796418 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.25988 0.0 4.28493    
cufflinks 0.386789 0.0 1.43654   Low
cufflinks 4.6863 0.0 13.3921    
cufflinks 1.08444 0.0 3.75269    
cufflinks 2.06007 0.0 6.56002    
cufflinks 2.95926 0.0 8.97532    
cufflinks 6.69254 0.0 18.4114   High
cufflinks 4.43118 0.0 12.746    
cufflinks 1.56649 0.0 5.19818    
cufflinks 35.738     High  
cufflinks 58.735     High  
cufflinks 27.075     High  
cufflinks 2.299        
cufflinks 0.92       Low
cufflinks 12.657     High  
cufflinks 2.027        
cufflinks 767.637     High High
cufflinks 7.307     High  
cufflinks 0.486       Low
cufflinks 1.488        
cufflinks 54.861     High  
cufflinks 1.832        
cufflinks 1.329        
cufflinks 46.524     High  
cufflinks 1.37        
cufflinks 130.147     High High

0 Strain