Gene : Glyma.11G107000 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR22950:SF205 - AMINO ACID PERMEASE 3-RELATED Genomic Order:  1070
Name:  ? Glyma.11G107000 Secondary Identifier:  ? PAC:30527835
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G107000 0.5kb upstream 0.5kb upstream 3795 true Chr11: 8150657-8154451 Glycine max
Glyma.11G107000 0.5kb upstream 0.5kb upstream 500 false Chr11: 8153952-8154451 Glycine max
Glyma.11G107000 0.5kb downstream 0.5kb downstream 3795 true Chr11: 8150157-8153951 Glycine max
Glyma.11G107000 0.5kb downstream 0.5kb downstream 500 false Chr11: 8150157-8150656 Glycine max
Glyma.11G107000 1.0kb upstream 1.0kb upstream 4295 true Chr11: 8150657-8154951 Glycine max
Glyma.11G107000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8153952-8154951 Glycine max
Glyma.11G107000 1.0kb downstream 1.0kb downstream 4295 true Chr11: 8149657-8153951 Glycine max
Glyma.11G107000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8149657-8150656 Glycine max
Glyma.11G107000 2.0kb upstream 2.0kb upstream 5295 true Chr11: 8150657-8155951 Glycine max
Glyma.11G107000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8153952-8155951 Glycine max
Glyma.11G107000 2.0kb downstream 2.0kb downstream 5295 true Chr11: 8148657-8153951 Glycine max
Glyma.11G107000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8148657-8150656 Glycine max
Glyma.11G107000 5.0kb upstream 5.0kb upstream 8295 true Chr11: 8150657-8158951 Glycine max
Glyma.11G107000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8153952-8158951 Glycine max
Glyma.11G107000 5.0kb downstream 5.0kb downstream 8295 true Chr11: 8145657-8153951 Glycine max
Glyma.11G107000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8145657-8150656 Glycine max
Glyma.11G107000 10.0kb upstream 10.0kb upstream 13295 true Chr11: 8150657-8163951 Glycine max
Glyma.11G107000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8153952-8163951 Glycine max
Glyma.11G107000 10.0kb downstream 10.0kb downstream 13295 true Chr11: 8140657-8153951 Glycine max
Glyma.11G107000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8140657-8150656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310371 5265 Fabidae View MSA
124070773 5270 Rosid View MSA
123747196 5271 Pentapetalae View MSA
122795711 5272 Eudicot View MSA
122048359 5273 Angiosperm View MSA
121351118 5274 Embryophyte View MSA
123426213 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.64347 0.0 13.655    
cufflinks 0.478309 0.0 1.77644    
cufflinks 30.2546 0.0 81.7497 High High
cufflinks 8.70423 0.0 23.9163    
cufflinks 0.478293 0.0 1.77504    
cufflinks 0.0235096 0.0 0.100751 Low Low
cufflinks 0.203728 0.0 0.786253 Low  
cufflinks 17.5624 0.0 46.8646   High
cufflinks 1.1103 0.0 3.90503    
cufflinks 12.539     High High
cufflinks 0.477        
cufflinks 1.863        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.078       Low
cufflinks 2.181        
cufflinks 0.34        
cufflinks 1.216        
cufflinks 0.298        
cufflinks 4.516       High
cufflinks 0.781        
cufflinks 1.985        
cufflinks 0.494        
cufflinks 0.944        
cufflinks 3.045        
cufflinks 0.294        

0 Strain