Gene : Glyma.11G107600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23421:SF52 - BETA-GALACTOSIDASE 11-RELATED Genomic Order:  1076
Name:  ? Glyma.11G107600 Secondary Identifier:  ? PAC:30529327
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G107600 0.5kb upstream 0.5kb upstream 7043 true Chr11: 8210966-8218008 Glycine max
Glyma.11G107600 0.5kb upstream 0.5kb upstream 500 false Chr11: 8217509-8218008 Glycine max
Glyma.11G107600 0.5kb downstream 0.5kb downstream 7043 true Chr11: 8210466-8217508 Glycine max
Glyma.11G107600 0.5kb downstream 0.5kb downstream 500 false Chr11: 8210466-8210965 Glycine max
Glyma.11G107600 1.0kb upstream 1.0kb upstream 7543 true Chr11: 8210966-8218508 Glycine max
Glyma.11G107600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8217509-8218508 Glycine max
Glyma.11G107600 1.0kb downstream 1.0kb downstream 7543 true Chr11: 8209966-8217508 Glycine max
Glyma.11G107600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8209966-8210965 Glycine max
Glyma.11G107600 2.0kb upstream 2.0kb upstream 8543 true Chr11: 8210966-8219508 Glycine max
Glyma.11G107600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8217509-8219508 Glycine max
Glyma.11G107600 2.0kb downstream 2.0kb downstream 8543 true Chr11: 8208966-8217508 Glycine max
Glyma.11G107600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8208966-8210965 Glycine max
Glyma.11G107600 5.0kb upstream 5.0kb upstream 11543 true Chr11: 8210966-8222508 Glycine max
Glyma.11G107600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8217509-8222508 Glycine max
Glyma.11G107600 5.0kb downstream 5.0kb downstream 11543 true Chr11: 8205966-8217508 Glycine max
Glyma.11G107600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8205966-8210965 Glycine max
Glyma.11G107600 10.0kb upstream 10.0kb upstream 16543 true Chr11: 8210966-8227508 Glycine max
Glyma.11G107600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8217509-8227508 Glycine max
Glyma.11G107600 10.0kb downstream 10.0kb downstream 16543 true Chr11: 8200966-8217508 Glycine max
Glyma.11G107600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8200966-8210965 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310069 5265 Fabidae View MSA
124073107 5270 Rosid View MSA
123750727 5271 Pentapetalae View MSA
122791084 5272 Eudicot View MSA
122042357 5273 Angiosperm View MSA
121309952 5274 Embryophyte View MSA
123347574 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.712619 0.0 2.45487    
cufflinks 0.0694145 0.0 0.272141 Low  
cufflinks 4.5768 0.0 12.5232   High
cufflinks 0.132615 0.0 0.505706 Low  
cufflinks 0.0492491 0.0 0.195423 Low  
cufflinks 0.312029 0.0 1.14228    
cufflinks 0.00565381 0.0 0.0258956 Low Low
cufflinks 0.231958 0.0 0.861725    
cufflinks 0.031874 0.0 0.128544 Low  
cufflinks 0.084     Low  
cufflinks 0.006     Low Low
cufflinks 0.931       High
cufflinks 0.02     Low  
cufflinks 0.022     Low  
cufflinks 0.003     Low Low
cufflinks 0.171        
cufflinks 0.009     Low  
cufflinks 6.89       High
cufflinks 0.088     Low  
cufflinks 0.152        
cufflinks 0.012     Low  
cufflinks 0.209        
cufflinks 0.081     Low  
cufflinks 0.021     Low  
cufflinks 0.178        
cufflinks 0.011     Low  

0 Strain