Gene : Glyma.11G108900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10584//PTHR10584:SF162 - SUGAR KINASE Genomic Order:  1089
Name:  ? Glyma.11G108900 Secondary Identifier:  ? PAC:30528575
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ANAEROFRUCAT-PWY Glycine max pathologic  
Gmax ANAGLYCOLYSIS-PWY Glycine max pathologic  
Gmax PWY-1042 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G108900 0.5kb upstream 0.5kb upstream 4007 true Chr11: 8298654-8302660 Glycine max
Glyma.11G108900 0.5kb upstream 0.5kb upstream 500 false Chr11: 8298654-8299153 Glycine max
Glyma.11G108900 0.5kb downstream 0.5kb downstream 4007 true Chr11: 8299154-8303160 Glycine max
Glyma.11G108900 0.5kb downstream 0.5kb downstream 500 false Chr11: 8302661-8303160 Glycine max
Glyma.11G108900 1.0kb upstream 1.0kb upstream 4507 true Chr11: 8298154-8302660 Glycine max
Glyma.11G108900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8298154-8299153 Glycine max
Glyma.11G108900 1.0kb downstream 1.0kb downstream 4507 true Chr11: 8299154-8303660 Glycine max
Glyma.11G108900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8302661-8303660 Glycine max
Glyma.11G108900 2.0kb upstream 2.0kb upstream 5507 true Chr11: 8297154-8302660 Glycine max
Glyma.11G108900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8297154-8299153 Glycine max
Glyma.11G108900 2.0kb downstream 2.0kb downstream 5507 true Chr11: 8299154-8304660 Glycine max
Glyma.11G108900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8302661-8304660 Glycine max
Glyma.11G108900 5.0kb upstream 5.0kb upstream 8507 true Chr11: 8294154-8302660 Glycine max
Glyma.11G108900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8294154-8299153 Glycine max
Glyma.11G108900 5.0kb downstream 5.0kb downstream 8507 true Chr11: 8299154-8307660 Glycine max
Glyma.11G108900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8302661-8307660 Glycine max
Glyma.11G108900 10.0kb upstream 10.0kb upstream 13507 true Chr11: 8289154-8302660 Glycine max
Glyma.11G108900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8289154-8299153 Glycine max
Glyma.11G108900 10.0kb downstream 10.0kb downstream 13507 true Chr11: 8299154-8312660 Glycine max
Glyma.11G108900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8302661-8312660 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301925 5265 Fabidae View MSA
124063069 5270 Rosid View MSA
123736947 5271 Pentapetalae View MSA
122789457 5272 Eudicot View MSA
122045290 5273 Angiosperm View MSA
121350301 5274 Embryophyte View MSA
123427839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.88843 0.0 21.8763   High
cufflinks 7.55563 0.0 21.0363   High
cufflinks 5.45195 0.0 15.6851    
cufflinks 5.72659 0.0 16.4184    
cufflinks 3.81455 0.0 11.5504    
cufflinks 3.38658 0.0 10.4084   Low
cufflinks 4.20031 0.0 12.5643    
cufflinks 4.62271 0.0 13.6154    
cufflinks 2.88314 0.0 9.07027   Low
cufflinks 1.615        
cufflinks 0.741        
cufflinks 2.509        
cufflinks 0.873        
cufflinks 1.56        
cufflinks 0.91        
cufflinks 8.641     High High
cufflinks 0.431       Low
cufflinks 2.96        
cufflinks 4.123        
cufflinks 8.488     High High
cufflinks 0.891        
cufflinks 7.842     High High
cufflinks 7.284       High
cufflinks 1.054        
cufflinks 8.518     High High
cufflinks 0.565       Low

0 Strain