Gene : Glyma.11G109400 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG3090 - Prohibitin-like protein Genomic Order:  1094
Name:  ? Glyma.11G109400 Secondary Identifier:  ? PAC:30530209
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G109400 0.5kb upstream 0.5kb upstream 4340 true Chr11: 8340396-8344735 Glycine max
Glyma.11G109400 0.5kb upstream 0.5kb upstream 500 false Chr11: 8344236-8344735 Glycine max
Glyma.11G109400 0.5kb downstream 0.5kb downstream 4340 true Chr11: 8339896-8344235 Glycine max
Glyma.11G109400 0.5kb downstream 0.5kb downstream 500 false Chr11: 8339896-8340395 Glycine max
Glyma.11G109400 1.0kb upstream 1.0kb upstream 4840 true Chr11: 8340396-8345235 Glycine max
Glyma.11G109400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8344236-8345235 Glycine max
Glyma.11G109400 1.0kb downstream 1.0kb downstream 4840 true Chr11: 8339396-8344235 Glycine max
Glyma.11G109400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8339396-8340395 Glycine max
Glyma.11G109400 2.0kb upstream 2.0kb upstream 5840 true Chr11: 8340396-8346235 Glycine max
Glyma.11G109400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8344236-8346235 Glycine max
Glyma.11G109400 2.0kb downstream 2.0kb downstream 5840 true Chr11: 8338396-8344235 Glycine max
Glyma.11G109400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8338396-8340395 Glycine max
Glyma.11G109400 5.0kb upstream 5.0kb upstream 8840 true Chr11: 8340396-8349235 Glycine max
Glyma.11G109400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8344236-8349235 Glycine max
Glyma.11G109400 5.0kb downstream 5.0kb downstream 8840 true Chr11: 8335396-8344235 Glycine max
Glyma.11G109400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8335396-8340395 Glycine max
Glyma.11G109400 10.0kb upstream 10.0kb upstream 13840 true Chr11: 8340396-8354235 Glycine max
Glyma.11G109400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8344236-8354235 Glycine max
Glyma.11G109400 10.0kb downstream 10.0kb downstream 13840 true Chr11: 8330396-8344235 Glycine max
Glyma.11G109400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8330396-8340395 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310745 5265 Fabidae View MSA
124065127 5270 Rosid View MSA
123749728 5271 Pentapetalae View MSA
122788534 5272 Eudicot View MSA
122042382 5273 Angiosperm View MSA
121346311 5274 Embryophyte View MSA
123424137 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.3246 0.0 86.6414 High  
cufflinks 19.2113 0.0 65.6573    
cufflinks 6.19967 0.0 21.7245   Low
cufflinks 14.5185 0.0 50.5323    
cufflinks 35.7868 0.0 125.683 High High
cufflinks 24.0014 0.0 82.1168 High  
cufflinks 21.767 0.0 74.3223 High  
cufflinks 16.8503 0.0 57.9658    
cufflinks 25.1047 0.0 85.8722 High  
cufflinks 3.372        
cufflinks 1.775        
cufflinks 2.474        
cufflinks 9.553     High High
cufflinks 13.048     High High
cufflinks 2.156        
cufflinks 2.889        
cufflinks 2.5        
cufflinks 2.614        
cufflinks 4.212        
cufflinks 1.867        
cufflinks 2.527        
cufflinks 2.241        
cufflinks 3.278        
cufflinks 1.672       Low
cufflinks 2.573        
cufflinks 3.068        

0 Strain