Gene : Glyma.11G109600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12510 - TROPONIN C-AKIN-1 PROTEIN Genomic Order:  1096
Name:  ? Glyma.11G109600 Secondary Identifier:  ? PAC:30528449
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G109600 0.5kb upstream 0.5kb upstream 1437 true Chr11: 8355123-8356559 Glycine max
Glyma.11G109600 0.5kb upstream 0.5kb upstream 500 false Chr11: 8355123-8355622 Glycine max
Glyma.11G109600 0.5kb downstream 0.5kb downstream 1437 true Chr11: 8355623-8357059 Glycine max
Glyma.11G109600 0.5kb downstream 0.5kb downstream 500 false Chr11: 8356560-8357059 Glycine max
Glyma.11G109600 1.0kb upstream 1.0kb upstream 1937 true Chr11: 8354623-8356559 Glycine max
Glyma.11G109600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8354623-8355622 Glycine max
Glyma.11G109600 1.0kb downstream 1.0kb downstream 1937 true Chr11: 8355623-8357559 Glycine max
Glyma.11G109600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8356560-8357559 Glycine max
Glyma.11G109600 2.0kb upstream 2.0kb upstream 2937 true Chr11: 8353623-8356559 Glycine max
Glyma.11G109600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8353623-8355622 Glycine max
Glyma.11G109600 2.0kb downstream 2.0kb downstream 2937 true Chr11: 8355623-8358559 Glycine max
Glyma.11G109600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8356560-8358559 Glycine max
Glyma.11G109600 5.0kb upstream 5.0kb upstream 5937 true Chr11: 8350623-8356559 Glycine max
Glyma.11G109600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8350623-8355622 Glycine max
Glyma.11G109600 5.0kb downstream 5.0kb downstream 5937 true Chr11: 8355623-8361559 Glycine max
Glyma.11G109600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8356560-8361559 Glycine max
Glyma.11G109600 10.0kb upstream 10.0kb upstream 10937 true Chr11: 8345623-8356559 Glycine max
Glyma.11G109600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8345623-8355622 Glycine max
Glyma.11G109600 10.0kb downstream 10.0kb downstream 10937 true Chr11: 8355623-8366559 Glycine max
Glyma.11G109600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8356560-8366559 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303100 5265 Fabidae View MSA
124068981 5270 Rosid View MSA
123739827 5271 Pentapetalae View MSA
122789137 5272 Eudicot View MSA
122047462 5273 Angiosperm View MSA
121349435 5274 Embryophyte View MSA
123425179 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.06878 0.0 7.38327    
cufflinks 1.41195 0.0 5.17402    
cufflinks 16.8548 0.0 47.1345   High
cufflinks 0.417198 0.0 1.61769   Low
cufflinks 3.79033 0.0 12.7365    
cufflinks 1.75274 0.0 6.32382    
cufflinks 3.55749 0.0 12.0577    
cufflinks 1.47089 0.0 5.37725    
cufflinks 5.28653 0.0 17.0848    
cufflinks 0.454       Low
cufflinks 8.465     High High
cufflinks 2.626        
cufflinks 0.655       Low
cufflinks 0.693       Low
cufflinks 7.668     High High
cufflinks 1.079        
cufflinks 6.709     High  
cufflinks 7.766     High High
cufflinks 1.101        
cufflinks 1.222        
cufflinks 5.902     High  
cufflinks 1.331        
cufflinks 0.704       Low
cufflinks 9.037     High High
cufflinks 0.803        
cufflinks 7.503     High High

0 Strain