Gene : Glyma.11G099900 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG2444 - WD40 repeat protein Genomic Order:  999
Name:  ? Glyma.11G099900 Secondary Identifier:  ? PAC:30531301
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G099900 0.5kb upstream 0.5kb upstream 6573 true Chr11: 7575098-7581670 Glycine max
Glyma.11G099900 0.5kb upstream 0.5kb upstream 500 false Chr11: 7581171-7581670 Glycine max
Glyma.11G099900 0.5kb downstream 0.5kb downstream 6573 true Chr11: 7574598-7581170 Glycine max
Glyma.11G099900 0.5kb downstream 0.5kb downstream 500 false Chr11: 7574598-7575097 Glycine max
Glyma.11G099900 1.0kb upstream 1.0kb upstream 7073 true Chr11: 7575098-7582170 Glycine max
Glyma.11G099900 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7581171-7582170 Glycine max
Glyma.11G099900 1.0kb downstream 1.0kb downstream 7073 true Chr11: 7574098-7581170 Glycine max
Glyma.11G099900 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7574098-7575097 Glycine max
Glyma.11G099900 2.0kb upstream 2.0kb upstream 8073 true Chr11: 7575098-7583170 Glycine max
Glyma.11G099900 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7581171-7583170 Glycine max
Glyma.11G099900 2.0kb downstream 2.0kb downstream 8073 true Chr11: 7573098-7581170 Glycine max
Glyma.11G099900 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7573098-7575097 Glycine max
Glyma.11G099900 5.0kb upstream 5.0kb upstream 11073 true Chr11: 7575098-7586170 Glycine max
Glyma.11G099900 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7581171-7586170 Glycine max
Glyma.11G099900 5.0kb downstream 5.0kb downstream 11073 true Chr11: 7570098-7581170 Glycine max
Glyma.11G099900 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7570098-7575097 Glycine max
Glyma.11G099900 10.0kb upstream 10.0kb upstream 16073 true Chr11: 7575098-7591170 Glycine max
Glyma.11G099900 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7581171-7591170 Glycine max
Glyma.11G099900 10.0kb downstream 10.0kb downstream 16073 true Chr11: 7565098-7581170 Glycine max
Glyma.11G099900 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7565098-7575097 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026331 5273 Angiosperm View MSA
122246637 5265 Fabidae Singleton cluster - no MSA
124042575 5270 Rosid View MSA
123748270 5271 Pentapetalae View MSA
122796771 5272 Eudicot View MSA
121345084 5274 Embryophyte View MSA
123424015 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.96174 0.0 3.49828    
cufflinks 1.47377 0.0 5.19629   High
cufflinks 0.937591 0.0 3.40144    
cufflinks 0.72018 0.0 2.6602    
cufflinks 0.765698 0.0 2.82357    
cufflinks 0.595108 0.0 2.2206   Low
cufflinks 1.07601 0.0 3.89029    
cufflinks 0.780998 0.0 2.87207    
cufflinks 1.03851 0.0 3.75707    
cufflinks 0.257        
cufflinks 0.201        
cufflinks 0.75        
cufflinks 0.34        
cufflinks 0.519        
cufflinks 0.308        
cufflinks 0.678        
cufflinks 0.054     Low Low
cufflinks 1.084       High
cufflinks 0.755        
cufflinks 0.866        
cufflinks 0.121       Low
cufflinks 0.808        
cufflinks 0.643        
cufflinks 0.237        
cufflinks 0.92        
cufflinks 0.09       Low

0 Strain